hide evidence, enumarate tag sources. closes #1581#1606
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oganm wants to merge 24 commits intohotfix-1.32.6from
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hide evidence, enumarate tag sources. closes #1581#1606oganm wants to merge 24 commits intohotfix-1.32.6from
oganm wants to merge 24 commits intohotfix-1.32.6from
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arteymix
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| Gemma.AnnotationCommon = { | ||
| objectClassMapping: function(objectClass){ | ||
| const map = { | ||
| BioMaterial: "Biomaterials", |
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The new terminology is "Sample" for BioMaterial and "Assay" for BioAssay.
arteymix
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Feb 5, 2026
| const map = { | ||
| BioMaterial: "Biomaterials", | ||
| FactorValue: "Experimental Factors", | ||
| ExperimentTag: "Experiment Annotations" |
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We use "Dataset" in favour of "Experiment" or "ExpressionExperiment".
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Feb 11, 2026
| checkData: function( eeId, geneList, callback ){ | ||
| var store = new Gemma.VisualizationStore() | ||
| store.on( 'exception', function( e,type, action, options, response, arg ){ | ||
| console.log('fuck') |
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This also includes the hiding of the data tab. You can rebase with -i to exclude that commit. |
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squeaky clean |
This reverts commit e418134.
…e phase" This reverts commit 8a5f392.
There is a bug in maven-site-plugin that prevents it from changing permissions on the correct site directory. Instead, just disable the feature since we're already changing permissions manually in the CI. Also, there is a deployment script that is coming up that will also address permissions for manual deployments.
Add contributors and a short description.
Use consistent line endings in source code
Report indexing progress in the current thread so they get picked up by the ProgressUpdateAppender and shown in the Web application. Remove unimplemented "Index ontologies".
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