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17 changes: 12 additions & 5 deletions monai/apps/datasets.py
Original file line number Diff line number Diff line change
Expand Up @@ -83,6 +83,7 @@ def __init__(
self.set_random_state(seed=seed)
tarfile_name = os.path.join(root_dir, self.compressed_file_name)
dataset_dir = os.path.join(root_dir, self.dataset_folder_name)
self.num_class = 0
if download:
download_and_extract(self.resource, tarfile_name, root_dir, self.md5)

Expand All @@ -98,27 +99,33 @@ def __init__(
def randomize(self, data: Optional[Any] = None) -> None:
self.rann = self.R.random()

def get_num_classes(self) -> int:
"""Get number of classes."""
return self.num_class

def _generate_data_list(self, dataset_dir: str) -> List[Dict]:
"""
Raises:
ValueError: When ``section`` is not one of ["training", "validation", "test"].

"""
class_names = sorted((x for x in os.listdir(dataset_dir) if os.path.isdir(os.path.join(dataset_dir, x))))
num_class = len(class_names)
self.num_class = len(class_names)
image_files = [
[
os.path.join(dataset_dir, class_names[i], x)
for x in os.listdir(os.path.join(dataset_dir, class_names[i]))
]
for i in range(num_class)
for i in range(self.num_class)
]
num_each = [len(image_files[i]) for i in range(num_class)]
num_each = [len(image_files[i]) for i in range(self.num_class)]
image_files_list = []
image_class = []
for i in range(num_class):
class_name = []
for i in range(self.num_class):
image_files_list.extend(image_files[i])
image_class.extend([i] * num_each[i])
class_name.extend([class_names[i]] * num_each[i])
num_total = len(image_class)

data = []
Expand All @@ -138,7 +145,7 @@ def _generate_data_list(self, dataset_dir: str) -> List[Dict]:
raise ValueError(
f'Unsupported section: {self.section}, available options are ["training", "validation", "test"].'
)
data.append({"image": image_files_list[i], "label": image_class[i]})
data.append({"image": image_files_list[i], "label": image_class[i], "class_name": class_name[i]})
return data


Expand Down
1 change: 1 addition & 0 deletions tests/test_mednistdataset.py
Original file line number Diff line number Diff line change
Expand Up @@ -52,6 +52,7 @@ def _test_dataset(dataset):

# testing from
data = MedNISTDataset(root_dir=testing_dir, transform=transform, section="test", download=False)
data.get_num_classes()
_test_dataset(data)
data = MedNISTDataset(root_dir=testing_dir, section="test", download=False)
self.assertTupleEqual(data[0]["image"].shape, (64, 64))
Expand Down