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Change type of qto_xyz to ndarray #5694

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Change type of qto_xyz to ndarray #5694

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Change type of qto_xyz to ndarray
Dec 8, 2022
d9c8c9b
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Dec 8, 2022
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10 changes: 4 additions & 6 deletions monai/data/image_reader.py
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Original file line number Diff line number Diff line change
Expand Up @@ -319,12 +319,10 @@ def _get_meta_dict(self, img) -> Dict:

"""
img_meta_dict = img.GetMetaDataDictionary()
meta_dict = {}
for key in img_meta_dict.GetKeys():
if key.startswith("ITK_"):
continue
val = img_meta_dict[key]
meta_dict[key] = np.asarray(val) if type(val).__name__.startswith("itk") else val
meta_dict = {key: img_meta_dict[key] for key in img_meta_dict.GetKeys() if not key.startswith("ITK_")}

if "qto_xyz" in meta_dict and not isinstance(meta_dict["qto_xyz"], np.ndarray):
meta_dict["qto_xyz"] = np.array(meta_dict["qto_xyz"])

meta_dict["spacing"] = np.asarray(img.GetSpacing())
return meta_dict
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