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5 changes: 2 additions & 3 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -178,17 +178,16 @@ Demonstrates the use of the `ThreadBuffer` class used to generate data batches d
Illustrate reading NIfTI files and test speed of different transforms on different devices.

**modules**
#### [engines](./modules/bundles)
Get started tutorial and concrete training / inference examples for MONAI bundle features.
#### [engines](./modules/engines)
Training and evaluation examples of 3D segmentation based on UNet3D and synthetic dataset with MONAI workflows, which contains engines, event-handlers, and post-transforms. And GAN training and evaluation example for a medical image generative adversarial network. Easy run training script uses `GanTrainer` to train a 2D CT scan reconstruction network. Evaluation script generates random samples from a trained network.

The examples are built with MONAI workflows, mainly contain: trainer/evaluator, handlers, post_transforms, etc.
#### [3d_image_transforms](./modules/3d_image_transforms.ipynb)
This notebook demonstrates the transformations on volumetric images.

#### [2d_inference_3d_volume](./modules/2d_inference_3d_volume.ipynb)
Tutorial that demonstrates how monai `SlidingWindowInferer` can be used when a 3D volume input needs to be provided slice-by-slice to a 2D model and finally, aggregated into a 3D volume.


#### [autoencoder_mednist](./modules/autoencoder_mednist.ipynb)
This tutorial uses the MedNIST hand CT scan dataset to demonstrate MONAI's autoencoder class. The autoencoder is used with an identity encode/decode (i.e., what you put in is what you should get back), as well as demonstrating its usage for de-blurring and de-noising.
#### [batch_output_transform](./modules/batch_output_transform.py)
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