Skip to content
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
1 change: 1 addition & 0 deletions .gitignore
Original file line number Diff line number Diff line change
Expand Up @@ -4,3 +4,4 @@ _site/
.jekyll-metadata
release
node_modules
.DS_Store
Binary file added docs/assets/img/labid-screenshot.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file added docs/assets/img/labid.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
32 changes: 32 additions & 0 deletions docs/pages/use_cases/labid.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,32 @@
---
page_id: labid
title: Lab Integrated Data (LabID)
description: LabID is an all-in-one research data management platform for life sciences institutes. It uses RO-Crate as a format to import/export workflows and workflow runs.
url: https://labid-demo.embl.de/home
image: labid.png
domains: [biology, biomedical_science, omics]
tasks: [conduct_research, data_handling, manage_data, software_development]
roles: [data_analyst, data_steward, researcher, software_developer]
---

# Lab Integrated Data (LabID)

[![LabID logo](../../assets/img/labid.png)](https://labid-demo.embl.de/home)

LabID is an all-in-one FAIR data management platform for life sciences institutes, developed at the EMBL Heidelberg ([MODIS](https://www.embl.org/groups/modis/)).
It allows keeping track of datasets, samples, and inventory, while featuring an Electronic Lab Notebook.

The workflow integration of LabID also facilitates collaborative workflow development and versioning, as well as keeping track of workflow executions.
Workflows and workflow runs can be imported and exported from various sources including Galaxy, WorkflowHub and Git repositories.

LabID takes advantage of the [Workflow RO-Crate](https://about.workflowhub.eu/Workflow-RO-Crate/) and [Workflow Run RO-Crate profiles](https://www.researchobject.org/workflow-run-crate/profiles/) to import workflows from [WorkflowHub](https://workflowhub.eu/), and export workflows and workflow runs to other platforms.

![LabID workflow integration](../../assets/img/labid-screenshot.png)

## Resources
* Open-source repositories for the LabID project are [hosted on GitLab](https://gitlab.com/lab-integrated-data).
* The documentation is available at <https://grp-gbcs.embl-community.io/labid-user-docs/>.

## Funding
This work was supported through the Open Science Clusters’ Action for Research and Society ([OSCARS](https://oscars-project.eu)) European project under grant agreement Nº101129751.
See [LabID PROV](https://oscars-project.eu/projects/labid-prov-tracking-and-sharing-data-provenance-ro-crate-lab-integrated-data).