145 add packagedowngithub pages

.Rbuildignore

@@ -5,3 +5,5 @@
 ^outline\.md$
 ^\.github$
 ^\.lintr$
+^_pkgdown\.yml$
+^pkgdown$

.github/workflows/pkgdown.yaml

@@ -0,0 +1,50 @@
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
+on:
+  push:
+    branches: [main, master, dev]
+  pull_request:
+    branches: [main, master, dev]
+  release:
+    types: [published]
+  workflow_dispatch:
+
+name: pkgdown
+
+permissions: read-all
+
+jobs:
+  pkgdown:
+    runs-on: ubuntu-latest
+    # Only restrict concurrency for non-PR jobs
+    concurrency:
+      group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }}
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    permissions:
+      contents: write
+    steps:
+      - uses: actions/checkout@v4
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          extra-packages: any::pkgdown, local::.
+          needs: website
+
+      - name: Build site
+        run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)
+        shell: Rscript {0}
+
+      - name: Deploy to GitHub pages 🚀
+        if: github.event_name != 'pull_request'
+        uses: JamesIves/github-pages-deploy-action@v4.5.0
+        with:
+          clean: false
+          branch: gh-pages
+          folder: docs

.gitignore

@@ -107,4 +107,5 @@ dist
 
 # Ignoring R History and R Data Root:
 .Rhistory
-.RData
+.RData
+docs

DESCRIPTION

@@ -1,6 +1,6 @@
 Package: nepExplorer
 Type: Package
-Title: Interactive Graphic for Exploring Kidney Function Data in Clinical Trials.\
+Title: Interactive Graphic for Exploring Kidney Function Data in Clinical Trials.
 Version: 0.1.0
 Authors@R: c(
 	person("Preston", "Burns", email = "s.preston.burns@gmail.com", role = c("cre","aut")),
@@ -9,7 +9,7 @@ Authors@R: c(
 	person("Eli", "Miller", email = "eli.miller@atorusresearch.com", role = "aut"),
 	person("James", "Buchanan", email = "jbuchanan@covilance.com", role = "aut"))
 Description: Shiny app of interactive creatinine scatterplot for exploring kidney function data in clinical trials.
-URL: https://github.com/SafetyGraphics/nep-explorer
+URL: https://github.com/SafetyGraphics/nep-explorer, https://safetygraphics.github.io/nepExplorer/
 BugReports: https://github.com/SafetyGraphics/nep-explorer/issues
 Depends: R (>= 4.0)
 License: MIT + file LICENSE

_pkgdown.yml

@@ -0,0 +1,4 @@
+url: https://safetygraphics.github.io/nepExplorer/
+template:
+  bootstrap: 5
+