OpenScope Repository - Sarvestani Lab

Install Dependencies

can include the anaconda environment set up and etc.

Set up config file

1. Install dotenv: pip install dotenv
2. Create a new config.env file in the same directory as average_rf.ipynb
3. Add the following contents:

   FULL_DATA_DIR=/Volumes/My Passport/001568
   SAMPLE_DATA_DIR=/Users/serenazhu/sarvestani_lab/000021

   Change the values of the directories according to your local filepath. FULL_DATA_DIR is the directory with the full data, SAMPLE_DATA_DIR is where you want to download the sample .nwb file.