Fix problems with python execution

[tamarinvs19]

Description

• no minimization when the tested module is also installed from pip (as Too many similar test in langchain project for get_color_mapping function #1945): order in sys.path have been changed
• removed module coverage and replaced it with a builtins module trace
• fixed problem with one execution timeout: previous one timeoutsocket.soTimeout had been used by some executions instead only one, current realization create a thread for execution and interrupt it after timeout
• update utbot_executor, new version 1.3.1: more logs in DEBUG mode and fix problems with coverage

Fixes #1945

How to test

Manual tests

• minimization and coverage: see Too many similar test in langchain project for get_color_mapping function #1945 (with or without installed module langchain)
• timeout: expected that this function doesn't have any tests (in future we can generate tests with timeout same as UtBotJava, see Python: generate tests for timeouted functions #1939)

import time
def f(x: int):
    time.sleep(10)
    return x

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