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Updated requirements and added schedule for the learning module.
Updated the course schedule and resources in the README.
Removed mention of self-assessments from activities section.
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FanWang0216
requested review from
RohanAlexander,
Strug-GDSLab,
danielrazavi and
moejennie
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Hello, thank you for your contribution. If you are a participant, please close this pull request and open it in your own forked repository instead of here. Please read the instructions on your onboarding Assignment Submission Guide more carefully. If you are not a participant, please give us up to 72 hours to review your PR. Alternatively, you can reach out to us directly to expedite the review process. |
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Hello, thank you for your contribution. If you are a participant, please close this pull request and open it in your own forked repository instead of here. Please read the instructions on your onboarding Assignment Submission Guide more carefully. If you are not a participant, please give us up to 72 hours to review your PR. Alternatively, you can reach out to us directly to expedite the review process. |
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Hello, thank you for your contribution. If you are a participant, please close this pull request and open it in your own forked repository instead of here. Please read the instructions on your onboarding Assignment Submission Guide more carefully. If you are not a participant, please give us up to 72 hours to review your PR. Alternatively, you can reach out to us directly to expedite the review process. |
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…arning Support Staff to Learning Support Team
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Hello, thank you for your contribution. If you are a participant, please close this pull request and open it in your own forked repository instead of here. Please read the instructions on your onboarding Assignment Submission Guide more carefully. If you are not a participant, please give us up to 72 hours to review your PR. Alternatively, you can reach out to us directly to expedite the review process. |
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Hello, thank you for your contribution. If you are a participant, please close this pull request and open it in your own forked repository instead of here. Please read the instructions on your onboarding Assignment Submission Guide more carefully. If you are not a participant, please give us up to 72 hours to review your PR. Alternatively, you can reach out to us directly to expedite the review process. |
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Hello, thank you for your contribution. If you are a participant, please close this pull request and open it in your own forked repository instead of here. Please read the instructions on your onboarding Assignment Submission Guide more carefully. If you are not a participant, please give us up to 72 hours to review your PR. Alternatively, you can reach out to us directly to expedite the review process. |
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Hi @danielrazavi, In the README.md, we say: “The technical facilitator will upload any live coding files to this repository for participants to revisit under ./04_this_cohort.” For my module, I’ll be working through the tutorial files in ./02_activities. During the live session, I won’t open those files directly—instead, I’ll clear the code and re-type it so students can follow along. Given that, is it okay to keep the repo structure as-is, with the live coding happening in the tutorial files and nothing being uploaded to ./04_this_cohort? |
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@FanWang0216 yes it should be fine. |
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Hi @danielrazavi, I have gone through all files and thank you again for all helpful edits. When I try to render tutorial I, I’m getting directory/path errors. My working directory ends up at: /Users/macbook/Desktop/gen_data/02_activities/tutorials/ So references for the dataset like: ./02_activities/data/gwa.qc.fam fail because that path is being resolved relative to the tutorials folder. On my end, adding this at the top fixes it by forcing the root directory: knitr::opts_knit$set(root.dir = normalizePath("../../")) Before I apply similar changes across all tutorials and assignments, I wanted to confirm with you that this is the intended approach or it is due to some other issues on my end. Everything else looks good to me. Thank you very much for your guidance! |
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Hello, thank you for your contribution. If you are a participant, please close this pull request and open it in your own forked repository instead of here. Please read the instructions on your onboarding Assignment Submission Guide more carefully. If you are not a participant, please give us up to 72 hours to review your PR. Alternatively, you can reach out to us directly to expedite the review process. |
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Hello, thank you for your contribution. If you are a participant, please close this pull request and open it in your own forked repository instead of here. Please read the instructions on your onboarding Assignment Submission Guide more carefully. If you are not a participant, please give us up to 72 hours to review your PR. Alternatively, you can reach out to us directly to expedite the review process. |
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Hello, thank you for your contribution. If you are a participant, please close this pull request and open it in your own forked repository instead of here. Please read the instructions on your onboarding Assignment Submission Guide more carefully. If you are not a participant, please give us up to 72 hours to review your PR. Alternatively, you can reach out to us directly to expedite the review process. |
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Looks good to me. Merging in.
2 participants
Hi, I have updated the repository for the Genetic Data Analysis Toolbox, including all course materials. Aside from the software setup (which I’m waiting on from Dan), this includes everything for the module. I look forward to your feedback.