adding some of the tooltips by Rudhik1904 · Pull Request #150 · Vitek-Lab/MSstatsShiny

Rudhik1904 · 2026-02-03T06:54:48Z

adding tool tips for the matrix

Summary by CodeRabbit

New Features
- Replaced the previous static hint with context-aware on-screen hints.
- The pairwise comparison hint "A value of −1 represents the control group, and a value of 1 represents the treatment group" is now shown only in all_pairwise, all_vs_one, or custom_pairwise modes; otherwise the original hint is retained.

coderabbitai · 2026-02-03T06:55:08Z

📝 Walkthrough

Walkthrough

Adds conditional rendering for the "Comparison matrix" help text: the hint "A value of −1 represents the control group, and a value of 1 represents the treatment group" is shown only when comparison_mode is all_pairwise, all_vs_one, or custom_pairwise; otherwise the prior hint remains. (≤50 words)

Changes

Cohort / File(s)	Summary
Conditional UI Help Text `R/module-statmodel-server.R`	Add conditional help/hint rendering under "Comparison matrix": display the contrast-encoding hint when `comparison_mode` ∈ {`all_pairwise`, `all_vs_one`, `custom_pairwise`}, otherwise keep existing hint text.

Sequence Diagram(s)

(omitted — changes are a small UI conditional tweak without multi-component sequential flow)

Estimated code review effort

🎯 2 (Simple) | ⏱️ ~10 minutes

Possibly related PRs

refactor(statmodel): Put conditional logic in backend for comparison matrices #129 — Modifies R/module-statmodel-server.R with related conditional UI logic for contrast/comparison modes.
refactor(statsmodel): Refactor statsmodel server into sub-functions #119 — Related adjustments to comparison-matrix UI and contrast-mode rendering.

Suggested reviewers

sszvetecz

Poem

🐰 A hop, a hint beside the grid,
−1, 1 — the groups are rid.
I nibble lines and tidy text,
A carrot cheers this tiny fix. 🥕

🚥 Pre-merge checks | ✅ 2 | ❌ 1

❌ Failed checks (1 inconclusive)

Check name	Status	Explanation	Resolution
Title check	❓ Inconclusive	The title 'adding some of the tooltips' is vague and uses non-descriptive language that doesn't clearly convey the specific change being made.	Provide a more specific title like 'Add conditional tooltip for comparison matrix mode selection' to clearly describe which tooltips are being added and what they affect.

✅ Passed checks (2 passed)

Check name	Status	Explanation
Description Check	✅ Passed	Check skipped - CodeRabbit’s high-level summary is enabled.
Docstring Coverage	✅ Passed	No functions found in the changed files to evaluate docstring coverage. Skipping docstring coverage check.

_{✏️ Tip: You can configure your own custom pre-merge checks in the settings.}

✨ Finishing touches

🧪 Generate unit tests (beta)

Create PR with unit tests
Post copyable unit tests in a comment
Commit unit tests in branch Add-tootips-for-contrast-matrices

No actionable comments were generated in the recent review. 🎉

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❤️ Share

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github-actions · 2026-02-03T06:55:41Z

Failed to generate code suggestions for PR

to only apply to response curves

coderabbitai

Actionable comments posted: 1

🤖 Fix all issues with AI agents

In `@R/module-statmodel-server.R`:
- Around line 679-691: Remove the stray leading space in the tooltip string so
it reads "A value of −1 represents the control group…" (update the string in the
block that checks NAMESPACE_STATMODEL$comparison_mode against
CONSTANTS_STATMODEL$comparison_mode_all_pairwise,
CONSTANTS_STATMODEL$comparison_mode_all_vs_one, and
CONSTANTS_STATMODEL$comparison_mode_custom_pairwise). Also, since the table is
editable per editable_options (see editable_options handling near lines
660–667), add the same "This table is interactive. Click values to edit." hint
(from the response_curve branch that checks
CONSTANTS_STATMODEL$comparison_mode_response_curve) to these pairwise/all-vs-one
branches so users are informed in all editable modes.

coderabbitai · 2026-02-09T16:11:32Z

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Error details

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Skipping docstring coverage check. |\n\n</details>\n\n<sub>✏️ Tip: You can configure your own custom pre-merge checks in the settings.</sub>\n\n</details>\n\n<!-- pre_merge_checks_walkthrough_end -->\n\n<!-- finishing_touch_checkbox_start -->\n\n<details>\n<summary>✨ Finishing touches</summary>\n\n<details>\n<summary>🧪 Generate unit tests (beta)</summary>\n\n- [ ] <!-- {\"checkboxId\": \"f47ac10b-58cc-4372-a567-0e02b2c3d479\", \"radioGroupId\": \"utg-output-choice-group-unknown_comment_id\"} -->   Create PR with unit tests\n- [ ] <!-- {\"checkboxId\": \"07f1e7d6-8a8e-4e23-9900-8731c2c87f58\", \"radioGroupId\": \"utg-output-choice-group-unknown_comment_id\"} -->   Post copyable unit tests in a comment\n- [ ] <!-- {\"checkboxId\": \"6ba7b810-9dad-11d1-80b4-00c04fd430c8\", \"radioGroupId\": \"utg-output-choice-group-unknown_comment_id\"} -->   Commit unit tests in branch `Add-tootips-for-contrast-matrices`\n\n</details>\n\n</details>\n\n<!-- finishing_touch_checkbox_end -->\n\n\n---\n\nNo actionable comments were generated in the recent review. 🎉\n\n<!-- tips_start -->\n\n---\n\nThanks for using [CodeRabbit](https://coderabbit.ai?utm_source=oss&utm_medium=github&utm_campaign=Vitek-Lab/MSstatsShiny&utm_content=150)! 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coderabbitai · 2026-02-09T16:11:58Z

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Failed to replace (edit) comment. This is likely due to insufficient permissions or the comment being deleted.

Error details

{"name":"HttpError","status":500,"request":{"method":"PATCH","url":"https://api.github.com/repos/Vitek-Lab/MSstatsShiny/issues/comments/3839430387","headers":{"accept":"application/vnd.github.v3+json","user-agent":"octokit.js/0.0.0-development octokit-core.js/7.0.6 Node.js/24","authorization":"token [REDACTED]","content-type":"application/json; charset=utf-8"},"body":{"body":"<!-- This is an auto-generated comment: summarize by coderabbit.ai -->\n<!-- walkthrough_start -->\n\n<details>\n<summary>📝 Walkthrough</summary>\n\n## Walkthrough\n\nAdds a conditional hint to the \"Comparison matrix\" UI in the statistical model server: the hint \"A value of −1 represents the control group, and a value of 1 represents the treatment group\" is displayed only when `comparison_mode` is one of `all_pairwise`, `all_vs_one`, or `custom_pairwise`; otherwise the existing hint is shown.\n\n## Changes\n\n|Cohort / File(s)|Summary|\n|---|---|\n|**Conditional UI Help Text** <br> `R/module-statmodel-server.R`|Introduce conditional rendering for the Comparison matrix help text: show the contrast-encoding hint when `comparison_mode` ∈ {`all_pairwise`, `all_vs_one`, `custom_pairwise`}; otherwise retain the prior hint text.|\n\n## Estimated code review effort\n\n🎯 2 (Simple) | ⏱️ ~10 minutes\n\n## Possibly related PRs\n\n- Vitek-Lab/MSstatsShiny#129 — Modifies contrast-mode UI behavior in `R/module-statmodel-server.R`, similar conditional UI adjustments.\n\n## Suggested reviewers\n\n- sszvetecz\n\n## Poem\n\n> 🐰 A hop, a hint, a helpful sign,  \n> When pairs are set, the marks align.  \n> −1 for control, 1 for play,  \n> I nibble bugs and code away. 🥕\n\n</details>\n\n<!-- walkthrough_end -->\n\n\n<!-- pre_merge_checks_walkthrough_start -->\n\n<details>\n<summary>🚥 Pre-merge checks | ✅ 2 | ❌ 1</summary>\n\n<details>\n<summary>❌ Failed checks (1 inconclusive)</summary>\n\n|  Check name | Status         | Explanation                                                                                                                                                          | Resolution                                                                                                                                                     |\n| :---------: | :------------- | :------------------------------------------------------------------------------------------------------------------------------------------------------------------- | :------------------------------------------------------------------------------------------------------------------------------------------------------------- |\n| Title check | ❓ Inconclusive | The title 'adding some of the tooltips' is vague and generic, using non-descriptive language that doesn't clearly convey which tooltips were added or their purpose. | Consider using a more specific title like 'Add contrast matrix tooltip for control/treatment group indicators' to clearly describe the specific tooltip added. |\n\n</details>\n<details>\n<summary>✅ Passed checks (2 passed)</summary>\n\n|     Check name     | Status   | Explanation                                                                                                |\n| :----------------: | :------- | :--------------------------------------------------------------------------------------------------------- |\n|  Description Check | ✅ Passed | Check skipped - CodeRabbit’s high-level summary is enabled.                                                |\n| Docstring Coverage | ✅ Passed | No functions found in the changed files to evaluate docstring coverage. 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adding some of the tooltips

82106ee

modify text help to be more user friendly and adjusted interactive text

8d28055

to only apply to response curves

coderabbitai Bot reviewed Feb 9, 2026

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Comment thread R/module-statmodel-server.R Outdated

fix interactive message

13e8fc9

remove whitespace

e872b64

tonywu1999 merged commit fb2f2c8 into devel Feb 9, 2026
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tonywu1999 deleted the Add-tootips-for-contrast-matrices branch February 9, 2026 16:33

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adding some of the tooltips#150

adding some of the tooltips#150
tonywu1999 merged 4 commits intodevelfrom
Add-tootips-for-contrast-matrices

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