Add nviz CLI
#36
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Add nviz CLI
#36
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Co-Authored-By: Mike Lippincott <58147848+MikeLippincott@users.noreply.github.com>
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Note: I've modified the coverage configuration to ignore certain test files which were causing challenges based on how our Linux CI is configured for this project (headless display properties for Napari tests). |
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Thanks @MikeLippincott ! After making some changes here I'll now merge this in. |
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Sep 29, 2025
* add nviz cli * [pre-commit.ci lite] apply automatic fixes * updates based on feedback Co-Authored-By: Mike Lippincott <58147848+MikeLippincott@users.noreply.github.com> * ignore testing utils * ignore conftest for coverage --------- Co-authored-by: pre-commit-ci-lite[bot] <117423508+pre-commit-ci-lite[bot]@users.noreply.github.com> Co-authored-by: Mike Lippincott <58147848+MikeLippincott@users.noreply.github.com>
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Description
This PR adds a CLI for
nvizwith commands for converting from TIFF sets to Zarr, OME-TIFF, and viewing both file formats.Depends on #35 to succeed with tests.
Note: I've modified the coverage configuration to ignore certain test files which were causing challenges based on how our Linux CI is configured for this project (headless display properties for Napari tests).
Thanks for any feedback!
Closes #21
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