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arjun_plot: customized plotting routines in matplotlib

Rationale

Over the course of doing research, I've had to generate many plots. Typically these have been using custom matplotlib routines. The package here has specific classes and modules which help with some common routines in plotting of genetic data.

Modules

  • utils: contains mostly small utility functions for matplotlib axes
  • admixture: contains routines for plotting ADMIXTURE bar-plots in (built off of the dystruct package)
  • pca: some custom routines for plotting PCA in genetics applications
  • statgen: custom plotting for statistical genetics applications (e.g. GWAS)

Stylesheets

In addition to these plotting routines, I have generated two matplotlib stylesheets that I have found useful when re-generating plots for presentations (particularly in LaTeX). They try to match all of the fonts that I typically use for presentations - like Fira Sans

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