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@mohamedawnallah mohamedawnallah commented Jul 30, 2025

Description

Fix failed testcases for beam_PreCommit_Python_ML and beam_PostCommit_Python workflows. Kicked off in #35733 (comment).

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Summary of Changes

Hello @mohamedawnallah, I'm Gemini Code Assist1! I'm currently reviewing this pull request and will post my feedback shortly. In the meantime, here's a summary to help you and other reviewers quickly get up to speed!

I've updated the run_pytest.sh script within the Python SDKs to enhance its ability to parse pytest marker arguments. This change specifically allows the script to correctly capture pytest marker groups that are enclosed in parentheses, improving the flexibility of test execution commands. A minor, unrelated change was also made to a GitHub trigger file.

Highlights

  • Pytest Marker Regex Enhancement: I've modified the marker_regex in sdks/python/scripts/run_pytest.sh to correctly capture pytest marker groups that include parentheses, such as (-m 'group1 and (group2 or group3)'). This enhances the script's ability to parse complex marker arguments.
  • CI Trigger Update: A small, non-functional update was made to .github/trigger_files/beam_PostCommit_Python.json, likely to trigger CI builds.
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Code Review

This pull request updates the run_pytest.sh script to better capture pytest marker expressions, specifically those enclosed in parentheses. The change modifies the regular expression used to extract the marker. While this improves handling for simple parenthesized markers, I've identified a potential issue with the new regex where it doesn't correctly handle nested parentheses, which could lead to incorrect test selection for complex marker expressions. My review includes a detailed comment on this issue.

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Assigning reviewers:

R: @tvalentyn for label python.

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This looks promising. All Precommit ML test have passed now.

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Thanks! I think the postcommit failures are actually due to flaky tests

@damccorm damccorm merged commit 72ecb47 into apache:master Jul 30, 2025
88 of 93 checks passed
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mohamedawnallah commented Jul 30, 2025

Thanks! I think the postcommit failures are actually due to flaky tests

@damccorm - I've just checked the postcommits now (https://github.com/apache/beam/actions/runs/16626460845/job/47044172409) they seem fail with:

2025-07-30T17:12:38.8100559Z * What went wrong:
2025-07-30T17:12:38.8100937Z Execution failed for task ':sdks:python:test-suites:direct:py39:dockerInDockerIntegrationTest'.
2025-07-30T17:12:38.8101406Z > Process 'command 'sh'' finished with non-zero exit value 5

It is related to this part:

// Integration tests that require Docker-in-Docker capabilities.
// These tests are marked with the `require_docker_in_docker` pytest marker
// because they rely on Docker-in-Docker configurations that are not supported
// on Beam's self-hosted GitHub Actions runners. Docker-in-Docker works on
// ubuntu-latest GitHub-hosted runners but not on self-hosted environments due
// to containerization architecture differences.
// Context: https://github.com/apache/beam/pull/35585
task dockerInDockerIntegrationTest {
dependsOn 'installGcpTest'
dependsOn ':sdks:python:sdist'
doLast {
def testOpts = basicTestOpts
def argMap = [
"test_opts": testOpts,
"suite": "postCommitIT-direct-py${pythonVersionSuffix}",
"collect": "require_docker_in_docker",
"runner": "TestDirectRunner",
]
def cmdArgs = mapToArgString(argMap)
exec {
executable 'sh'
args '-c', ". ${envdir}/bin/activate && ${runScriptsDir}/run_integration_test.sh $cmdArgs"
}
}
}

I will investigate what was the issue actually and come up with a patch for this

if it is urgent I think we can temporarily remove dockerInDockerIntegrationTest from here:

// Add all the RunInference framework IT tests to this gradle task that runs on Direct Runner Post commit suite.
project.tasks.register("inferencePostCommitIT") {
dependsOn = [
'torchInferenceTest',
'sklearnInferenceTest',
'tensorflowInferenceTest',
'xgboostInferenceTest',
'transformersInferenceTest',
'testcontainersTest',
'feastIntegrationTest',
'dockerInDockerIntegrationTest',
// (TODO) https://github.com/apache/beam/issues/25799
// uncomment tfx bsl tests once tfx supports protobuf 4.x
// 'tfxInferenceTest',
]
}

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tvalentyn commented Aug 2, 2025

Hi @mohamedawnallah - which tool did you use to visualize the regex in the description? Looks neat.

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Hi @mohamedawnallah - which tool did you use to visualize the regex in the description? Looks neat.

I used this one https://regexper.com/

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thanks!

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4 participants