Package upgrade within Atom fails

[iolsen]

apm upgrade from the command line worked, but from within Atom it failed with the following output:

> node-gyp rebuild

github@0.0.0 /private/var/folders/19/fkg_98p137bd8y8r_5b0nz1m0000gn/T/atom-git-package-clone-116102-73422-1320kos
+-- compare-sets@1.0.1 
+-- diff@2.2.2 
+-- etch@0.8.0 
| `-- virtual-dom@2.1.1 
|   +-- browser-split@0.0.1 
|   +-- error@4.4.0 
|   | +-- camelize@1.0.0 
|   | +-- string-template@0.2.1 
|   | `-- xtend@4.0.1 
|   +-- ev-store@7.0.0 
|   | `-- individual@3.0.0 
|   +-- global@4.3.1 
|   | +-- min-document@2.19.0 
|   | | `-- dom-walk@0.1.1 
|   | `-- process@0.5.2 
|   +-- is-object@1.0.1 
|   +-- next-tick@0.2.2 
|   +-- x-is-array@0.1.0 
|   `-- x-is-string@0.1.0 
+-- git-kitchen-sink@1.11.0 
| +-- checksum@0.1.1 
| | `-- optimist@0.3.7 
| |   `-- wordwrap@0.0.3 
| +-- decompress@4.0.0 
| | +-- decompress-tar@4.1.0 
| | | +-- file-type@3.9.0 
| | | +-- is-stream@1.1.0 
| | | `-- tar-stream@1.5.2 
| | |   +-- bl@1.1.2 
| | |   | `-- readable-stream@2.0.6 
| | |   +-- end-of-stream@1.1.0 
| | |   `-- readable-stream@2.1.5 
| | |     +-- buffer-shims@1.0.0 
| | |     +-- core-util-is@1.0.2 
| | |     +-- isarray@1.0.0 
| | |     +-- process-nextick-args@1.0.7 
| | |     +-- string_decoder@0.10.31 
| | |     `-- util-deprecate@1.0.2 
| | +-- decompress-tarbz2@4.1.0 
| | | +-- seek-bzip@1.0.5 
| | | | `-- commander@2.8.1 
| | | `-- unbzip2-stream@1.0.10 
| | |   +-- buffer@3.6.0 
| | |   | +-- base64-js@0.0.8 
| | |   | `-- ieee754@1.1.8 
| | |   `-- through@2.3.8 
| | +-- decompress-targz@4.0.0 
| | +-- decompress-unzip@4.0.1 
| | | +-- get-stream@2.3.1 
| | | | `-- object-assign@4.1.0 
| | | `-- yauzl@2.7.0 
| | |   +-- buffer-crc32@0.2.5 
| | |   `-- fd-slicer@1.0.1 
| | |     `-- pend@1.2.0 
| | +-- pify@2.3.0 
| | `-- strip-dirs@1.1.1 
| |   +-- chalk@1.1.3 
| |   | +-- ansi-styles@2.2.1 
| |   | +-- escape-string-regexp@1.0.5 
| |   | +-- has-ansi@2.0.0 
| |   | | `-- ansi-regex@2.0.0 
| |   | +-- strip-ansi@3.0.1 
| |   | `-- supports-color@2.0.0 
| |   +-- get-stdin@4.0.1 
| |   +-- is-absolute@0.1.7 
| |   | `-- is-relative@0.1.3 
| |   +-- is-natural-number@2.1.1 
| |   +-- minimist@1.2.0 
| |   `-- sum-up@1.0.3 
| +-- os-tmpdir@1.0.2 
| +-- progress@1.1.8 
| +-- request@2.76.0 
| | +-- aws-sign2@0.6.0 
| | +-- aws4@1.5.0 
| | +-- caseless@0.11.0 
| | +-- combined-stream@1.0.5 
| | | `-- delayed-stream@1.0.0 
| | +-- extend@3.0.0 
| | +-- forever-agent@0.6.1 
| | +-- form-data@2.1.1 
| | | `-- asynckit@0.4.0 
| | +-- har-validator@2.0.6 
| | | +-- commander@2.9.0 
| | | | `-- graceful-readlink@1.0.1 
| | | +-- is-my-json-valid@2.15.0 
| | | | +-- generate-function@2.0.0 
| | | | +-- generate-object-property@1.2.0 
| | | | | `-- is-property@1.0.2 
| | | | `-- jsonpointer@4.0.0 
| | | `-- pinkie-promise@2.0.1 
| | |   `-- pinkie@2.0.4 
| | +-- hawk@3.1.3 
| | | +-- boom@2.10.1 
| | | +-- cryptiles@2.0.5 
| | | +-- hoek@2.16.3 
| | | `-- sntp@1.0.9 
| | +-- http-signature@1.1.1 
| | | +-- assert-plus@0.2.0 
| | | +-- jsprim@1.3.1 
| | | | +-- extsprintf@1.0.2 
| | | | +-- json-schema@0.2.3 
| | | | `-- verror@1.3.6 
| | | `-- sshpk@1.10.1 
| | |   +-- asn1@0.2.3 
| | |   +-- assert-plus@1.0.0 
| | |   +-- bcrypt-pbkdf@1.0.0 
| | |   +-- dashdash@1.14.0 
| | |   | `-- assert-plus@1.0.0 
| | |   +-- ecc-jsbn@0.1.1 
| | |   +-- getpass@0.1.6 
| | |   | `-- assert-plus@1.0.0 
| | |   +-- jodid25519@1.0.2 
| | |   +-- jsbn@0.1.0 
| | |   `-- tweetnacl@0.14.3 
| | +-- is-typedarray@1.0.0 
| | +-- isstream@0.1.2 
| | +-- json-stringify-safe@5.0.1 
| | +-- mime-types@2.1.12 
| | | `-- mime-db@1.24.0 
| | +-- node-uuid@1.4.7 
| | +-- oauth-sign@0.8.2 
| | +-- qs@6.3.0 
| | +-- stringstream@0.0.5 
| | +-- tough-cookie@2.3.2 
| | | `-- punycode@1.4.1 
| | `-- tunnel-agent@0.4.3 
| `-- rimraf@2.5.4 
|   `-- glob@7.1.1 
|     +-- fs.realpath@1.0.0 
|     +-- inflight@1.0.6 
|     | `-- wrappy@1.0.2 
|     +-- inherits@2.0.3 
|     +-- minimatch@3.0.3 
|     +-- once@1.3.3 
|     `-- path-is-absolute@1.0.1 
+-- mkdirp@0.5.1 
| `-- minimist@0.0.8 
+-- multi-list-selection@0.1.1 
+-- recursive-readdir@2.1.0 
| `-- minimatch@3.0.2 
|   `-- brace-expansion@1.1.6 
|     +-- balanced-match@0.4.2 
|     `-- concat-map@0.0.1 
+-- temp@0.8.3 
| `-- rimraf@2.2.8 
`-- what-the-diff@0.1.1 


(node) warning: possible EventEmitter memory leak detected. 11 error listeners added. Use emitter.setMaxListeners() to increase limit.
Trace
    at TLSSocket.addListener (events.js:239:17)
    at TLSSocket.Readable.on (_stream_readable.js:673:33)
    at Request.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/npm-registry-client/lib/request.js:153:7)
    at emitOne (events.js:77:13)
    at Request.emit (events.js:169:7)
    at ClientRequest.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/request/request.js:791:10)
    at emitOne (events.js:82:20)
    at ClientRequest.emit (events.js:169:7)
    at tickOnSocket (_http_client.js:502:7)
    at onSocketNT (_http_client.js:514:5)
(node) warning: possible EventEmitter memory leak detected. 11 error listeners added. Use emitter.setMaxListeners() to increase limit.
Trace
    at TLSSocket.addListener (events.js:239:17)
    at TLSSocket.Readable.on (_stream_readable.js:673:33)
    at Request.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/npm-registry-client/lib/request.js:153:7)
    at emitOne (events.js:77:13)
    at Request.emit (events.js:169:7)
    at ClientRequest.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/request/request.js:791:10)
    at emitOne (events.js:82:20)
    at ClientRequest.emit (events.js:169:7)
    at tickOnSocket (_http_client.js:502:7)
    at onSocketNT (_http_client.js:514:5)
(node) warning: possible EventEmitter memory leak detected. 11 error listeners added. Use emitter.setMaxListeners() to increase limit.
Trace
    at TLSSocket.addListener (events.js:239:17)
    at TLSSocket.Readable.on (_stream_readable.js:673:33)
    at Request.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/npm-registry-client/lib/request.js:153:7)
    at emitOne (events.js:77:13)
    at Request.emit (events.js:169:7)
    at ClientRequest.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/request/request.js:791:10)
    at emitOne (events.js:82:20)
    at ClientRequest.emit (events.js:169:7)
    at tickOnSocket (_http_client.js:502:7)
    at onSocketNT (_http_client.js:514:5)
(node) warning: possible EventEmitter memory leak detected. 11 error listeners added. Use emitter.setMaxListeners() to increase limit.
Trace
    at TLSSocket.addListener (events.js:239:17)
    at TLSSocket.Readable.on (_stream_readable.js:673:33)
    at Request.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/npm-registry-client/lib/request.js:153:7)
    at emitOne (events.js:77:13)
    at Request.emit (events.js:169:7)
    at ClientRequest.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/request/request.js:791:10)
    at emitOne (events.js:82:20)
    at ClientRequest.emit (events.js:169:7)
    at tickOnSocket (_http_client.js:502:7)
    at onSocketNT (_http_client.js:514:5)
(node) warning: possible EventEmitter memory leak detected. 11 error listeners added. Use emitter.setMaxListeners() to increase limit.
Trace
    at TLSSocket.addListener (events.js:239:17)
    at TLSSocket.Readable.on (_stream_readable.js:673:33)
    at Request.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/npm-registry-client/lib/request.js:153:7)
    at emitOne (events.js:77:13)
    at Request.emit (events.js:169:7)
    at ClientRequest.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/request/request.js:791:10)
    at emitOne (events.js:82:20)
    at ClientRequest.emit (events.js:169:7)
    at tickOnSocket (_http_client.js:502:7)
    at onSocketNT (_http_client.js:514:5)

(node) warning: possible EventEmitter memory leak detected. 11 error listeners added. Use emitter.setMaxListeners() to increase limit.
Trace
    at TLSSocket.addListener (events.js:239:17)
    at TLSSocket.Readable.on (_stream_readable.js:673:33)
    at Request.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/npm-registry-client/lib/request.js:153:7)
    at emitOne (events.js:77:13)
    at Request.emit (events.js:169:7)
    at ClientRequest.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/request/request.js:791:10)
    at emitOne (events.js:82:20)
    at ClientRequest.emit (events.js:169:7)
    at tickOnSocket (_http_client.js:502:7)
    at onSocketNT (_http_client.js:514:5)
(node) warning: possible EventEmitter memory leak detected. 11 error listeners added. Use emitter.setMaxListeners() to increase limit.
Trace
    at TLSSocket.addListener (events.js:239:17)
    at TLSSocket.Readable.on (_stream_readable.js:673:33)
    at Request.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/npm-registry-client/lib/request.js:153:7)
    at emitOne (events.js:77:13)
    at Request.emit (events.js:169:7)
    at ClientRequest.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/request/request.js:791:10)
    at emitOne (events.js:82:20)
    at ClientRequest.emit (events.js:169:7)
    at tickOnSocket (_http_client.js:502:7)
    at onSocketNT (_http_client.js:514:5)
(node) warning: possible EventEmitter memory leak detected. 11 error listeners added. Use emitter.setMaxListeners() to increase limit.
Trace
    at TLSSocket.addListener (events.js:239:17)
    at TLSSocket.Readable.on (_stream_readable.js:673:33)
    at Request.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/npm-registry-client/lib/request.js:153:7)
    at emitOne (events.js:77:13)
    at Request.emit (events.js:169:7)
    at ClientRequest.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/request/request.js:791:10)
    at emitOne (events.js:82:20)
    at ClientRequest.emit (events.js:169:7)
    at tickOnSocket (_http_client.js:502:7)
    at onSocketNT (_http_client.js:514:5)
make: *** No rule to make target `../../../../../../../../../../Applications/Atom', needed by `Makefile'.  Stop.
gyp ERR! build error 
gyp ERR! stack Error: `make` failed with exit code: 2
gyp ERR! stack     at ChildProcess.onExit (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/node-gyp/lib/build.js:276:23)
gyp ERR! stack     at emitTwo (events.js:87:13)
gyp ERR! stack     at ChildProcess.emit (events.js:172:7)
gyp ERR! stack     at Process.ChildProcess._handle.onexit (internal/child_process.js:200:12)
gyp ERR! System Darwin 16.1.0
gyp ERR! command "/Applications/Atom Beta.app/Contents/Resources/app/apm/bin/node" "/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/.bin/node-gyp" "rebuild"
gyp ERR! cwd /private/var/folders/19/fkg_98p137bd8y8r_5b0nz1m0000gn/T/atom-git-package-clone-116102-73422-1320kos/node_modules/nsfw
gyp ERR! node -v v4.4.5
gyp ERR! node-gyp -v v3.4.0
gyp ERR! not ok 
npm ERR! Darwin 16.1.0
npm ERR! argv "/Applications/Atom Beta.app/Contents/Resources/app/apm/bin/node" "/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/npm/bin/npm-cli.js" "--globalconfig" "/Users/iolsen/.atom/.apm/.apmrc" "--userconfig" "/Users/iolsen/.atom/.apmrc" "install" "--runtime=electron" "--target=1.3.6" "--arch=x64"
npm ERR! node v4.4.5
npm ERR! npm  v3.10.5
npm ERR! code ELIFECYCLE

npm ERR! nsfw@1.0.12 install: `node-gyp rebuild`
npm ERR! Exit status 1
npm ERR! 
npm ERR! Failed at the nsfw@1.0.12 install script 'node-gyp rebuild'.
npm ERR! Make sure you have the latest version of node.js and npm installed.
npm ERR! If you do, this is most likely a problem with the nsfw package,
npm ERR! not with npm itself.
npm ERR! Tell the author that this fails on your system:
npm ERR!     node-gyp rebuild
npm ERR! You can get information on how to open an issue for this project with:
npm ERR!     npm bugs nsfw
npm ERR! Or if that isn't available, you can get their info via:
npm ERR!     npm owner ls nsfw
npm ERR! There is likely additional logging output above.

npm ERR! Please include the following file with any support request:
npm ERR!     /private/var/folders/19/fkg_98p137bd8y8r_5b0nz1m0000gn/T/atom-git-package-clone-116102-73422-1320kos/npm-debug.log```

[BinaryMuse]

@iolsen are you still seeing this

[winstliu]

This may have been fixed by atom/atom#13042.

[iolsen]

Unfortunately I'm up-to-date at the moment, but I'll try it again when I can.

[iolsen]

I'm still seeing this trying to update within 1.14.0-beta0.

Updating to latest sha failed.Hide output…
> nsfw@1.0.14 install /private/var/folders/19/fkg_98p137bd8y8r_5b0nz1m0000gn/T/atom-git-package-clone-117011-854-11cp3bh/node_modules/nsfw
> node-gyp rebuild

github@0.0.0 /private/var/folders/19/fkg_98p137bd8y8r_5b0nz1m0000gn/T/atom-git-package-clone-117011-854-11cp3bh
+-- atom-babel6-transpiler@0.0.3 
+-- babel-core@6.21.0 
| +-- babel-code-frame@6.20.0 
| | +-- chalk@1.1.3 
| | | +-- ansi-styles@2.2.1 
| | | +-- escape-string-regexp@1.0.5 
| | | +-- has-ansi@2.0.0 
| | | | `-- ansi-regex@2.0.0 
| | | +-- strip-ansi@3.0.1 
| | | `-- supports-color@2.0.0 
| | +-- esutils@2.0.2 
| | `-- js-tokens@2.0.0 
| +-- babel-helpers@6.16.0 
| +-- babel-messages@6.8.0 
| +-- babel-register@6.18.0 
| | +-- core-js@2.4.1 
| | +-- home-or-tmp@2.0.0 
| | | `-- os-homedir@1.0.2 
| | `-- source-map-support@0.4.8 
| +-- babel-runtime@6.20.0 
| | `-- regenerator-runtime@0.10.1 
| +-- babel-template@6.16.0 
| +-- babel-traverse@6.21.0 
| | +-- globals@9.14.0 
| | `-- invariant@2.2.2 
| +-- babel-types@6.21.0 
| | `-- to-fast-properties@1.0.2 
| +-- babylon@6.15.0 
| +-- convert-source-map@1.3.0 
| +-- debug@2.6.0 
| | `-- ms@0.7.2 
| +-- json5@0.5.1 
| +-- lodash@4.17.4 
| +-- minimatch@3.0.3 
| | `-- brace-expansion@1.1.6 
| |   +-- balanced-match@0.4.2 
| |   `-- concat-map@0.0.1 
| +-- path-is-absolute@1.0.1 
| +-- private@0.1.6 
| +-- slash@1.0.0 
| `-- source-map@0.5.6 
+-- babel-generator@6.21.0 
| +-- detect-indent@4.0.0 
| | `-- repeating@2.0.1 
| |   `-- is-finite@1.0.2 
| |     `-- number-is-nan@1.0.1 
| `-- jsesc@1.3.0 
+-- babel-plugin-transform-async-to-generator@6.16.0 
| +-- babel-helper-remap-async-to-generator@6.20.3 
| `-- babel-plugin-syntax-async-functions@6.13.0 
+-- babel-plugin-transform-class-properties@6.19.0 
| +-- babel-helper-function-name@6.18.0 
| `-- babel-plugin-syntax-class-properties@6.13.0 
+-- babel-plugin-transform-decorators-legacy@1.3.4 
| `-- babel-plugin-syntax-decorators@6.13.0 
+-- babel-plugin-transform-es2015-destructuring@6.19.0 
+-- babel-plugin-transform-es2015-modules-commonjs@6.18.0 
| `-- babel-plugin-transform-strict-mode@6.18.0 
+-- babel-plugin-transform-es2015-parameters@6.21.0 
| +-- babel-helper-call-delegate@6.18.0 
| | `-- babel-helper-hoist-variables@6.18.0 
| `-- babel-helper-get-function-arity@6.18.0 
+-- babel-plugin-transform-object-rest-spread@6.20.2 
| `-- babel-plugin-syntax-object-rest-spread@6.13.0 
+-- babel-preset-react@6.16.0 
| +-- babel-plugin-syntax-flow@6.18.0 
| +-- babel-plugin-syntax-jsx@6.18.0 
| +-- babel-plugin-transform-flow-strip-types@6.21.0 
| +-- babel-plugin-transform-react-display-name@6.8.0 
| +-- babel-plugin-transform-react-jsx@6.8.0 
| | `-- babel-helper-builder-react-jsx@6.21.1 
| +-- babel-plugin-transform-react-jsx-self@6.11.0 
| `-- babel-plugin-transform-react-jsx-source@6.9.0 
+-- compare-sets@1.0.1 
+-- core-decorators@0.15.0 
+-- diff@2.2.2 
+-- etch@0.8.0 
| `-- virtual-dom@2.1.1 
|   +-- browser-split@0.0.1 
|   +-- error@4.4.0 
|   | +-- camelize@1.0.0 
|   | +-- string-template@0.2.1 
|   | `-- xtend@4.0.1 
|   +-- ev-store@7.0.0 
|   | `-- individual@3.0.0 
|   +-- global@4.3.1 
|   | +-- min-document@2.19.0 
|   | | `-- dom-walk@0.1.1 
|   | `-- process@0.5.2 
|   +-- is-object@1.0.1 
|   +-- next-tick@0.2.2 
|   +-- x-is-array@0.1.0 
|   `-- x-is-string@0.1.0 
+-- git-kitchen-sink@1.11.0 
| +-- checksum@0.1.1 
| | `-- optimist@0.3.7 
| |   `-- wordwrap@0.0.3 
| +-- decompress@4.0.0 
| | +-- decompress-tar@4.1.0 
| | | +-- file-type@3.9.0 
| | | +-- is-stream@1.1.0 
| | | `-- tar-stream@1.5.2 
| | |   +-- bl@1.2.0 
| | |   +-- end-of-stream@1.1.0 
| | |   `-- readable-stream@2.2.2 
| | |     +-- buffer-shims@1.0.0 
| | |     +-- core-util-is@1.0.2 
| | |     +-- isarray@1.0.0 
| | |     +-- process-nextick-args@1.0.7 
| | |     +-- string_decoder@0.10.31 
| | |     `-- util-deprecate@1.0.2 
| | +-- decompress-tarbz2@4.1.0 
| | | +-- seek-bzip@1.0.5 
| | | | `-- commander@2.8.1 
| | | `-- unbzip2-stream@1.0.10 
| | |   +-- buffer@3.6.0 
| | |   | +-- base64-js@0.0.8 
| | |   | `-- ieee754@1.1.8 
| | |   `-- through@2.3.8 
| | +-- decompress-targz@4.0.0 
| | +-- decompress-unzip@4.0.1 
| | | +-- get-stream@2.3.1 
| | | `-- yauzl@2.7.0 
| | |   +-- buffer-crc32@0.2.13 
| | |   `-- fd-slicer@1.0.1 
| | |     `-- pend@1.2.0 
| | +-- pify@2.3.0 
| | `-- strip-dirs@1.1.1 
| |   +-- get-stdin@4.0.1 
| |   +-- is-absolute@0.1.7 
| |   | `-- is-relative@0.1.3 
| |   +-- is-natural-number@2.1.1 
| |   +-- minimist@1.2.0 
| |   `-- sum-up@1.0.3 
| +-- os-tmpdir@1.0.2 
| +-- progress@1.1.8 
| +-- request@2.79.0 
| | +-- aws-sign2@0.6.0 
| | +-- aws4@1.5.0 
| | +-- caseless@0.11.0 
| | +-- combined-stream@1.0.5 
| | | `-- delayed-stream@1.0.0 
| | +-- extend@3.0.0 
| | +-- forever-agent@0.6.1 
| | +-- form-data@2.1.2 
| | | `-- asynckit@0.4.0 
| | +-- har-validator@2.0.6 
| | | +-- commander@2.9.0 
| | | | `-- graceful-readlink@1.0.1 
| | | +-- is-my-json-valid@2.15.0 
| | | | +-- generate-function@2.0.0 
| | | | +-- generate-object-property@1.2.0 
| | | | | `-- is-property@1.0.2 
| | | | `-- jsonpointer@4.0.1 
| | | `-- pinkie-promise@2.0.1 
| | |   `-- pinkie@2.0.4 
| | +-- hawk@3.1.3 
| | | +-- boom@2.10.1 
| | | +-- cryptiles@2.0.5 
| | | +-- hoek@2.16.3 
| | | `-- sntp@1.0.9 
| | +-- http-signature@1.1.1 
| | | +-- assert-plus@0.2.0 
| | | +-- jsprim@1.3.1 
| | | | +-- extsprintf@1.0.2 
| | | | +-- json-schema@0.2.3 
| | | | `-- verror@1.3.6 
| | | `-- sshpk@1.10.1 
| | |   +-- asn1@0.2.3 
| | |   +-- assert-plus@1.0.0 
| | |   +-- bcrypt-pbkdf@1.0.0 
| | |   +-- dashdash@1.14.1 
| | |   | `-- assert-plus@1.0.0 
| | |   +-- ecc-jsbn@0.1.1 
| | |   +-- getpass@0.1.6 
| | |   | `-- assert-plus@1.0.0 
| | |   +-- jodid25519@1.0.2 
| | |   +-- jsbn@0.1.0 
| | |   `-- tweetnacl@0.14.5 
| | +-- is-typedarray@1.0.0 
| | +-- isstream@0.1.2 
| | +-- json-stringify-safe@5.0.1 
| | +-- mime-types@2.1.13 
| | | `-- mime-db@1.25.0 
| | +-- oauth-sign@0.8.2 
| | +-- qs@6.3.0 
| | +-- stringstream@0.0.5 
| | +-- tough-cookie@2.3.2 
| | | `-- punycode@1.4.1 
| | +-- tunnel-agent@0.4.3 
| | `-- uuid@3.0.1 
| `-- rimraf@2.5.4 
|   `-- glob@7.1.1 
|     +-- fs.realpath@1.0.0 
|     +-- inflight@1.0.6 
|     | `-- wrappy@1.0.2 
|     +-- inherits@2.0.3 
|     `-- once@1.3.3 
+-- mkdirp@0.5.1 
| `-- minimist@0.0.8 
+-- multi-list-selection@0.1.1 
+-- ncp@2.0.0 
+-- react@15.4.2 
| +-- fbjs@0.8.8 
| | +-- core-js@1.2.7 
| | +-- isomorphic-fetch@2.2.1 
| | | +-- node-fetch@1.6.3 
| | | | `-- encoding@0.1.12 
| | | |   `-- iconv-lite@0.4.15 
| | | `-- whatwg-fetch@2.0.1 
| | +-- promise@7.1.1 
| | | `-- asap@2.0.5 
| | +-- setimmediate@1.0.5 
| | `-- ua-parser-js@0.7.12 
| +-- loose-envify@1.3.0 
| `-- object-assign@4.1.0 
+-- react-dom@15.4.2 
+-- recursive-readdir@2.1.0 
| `-- minimatch@3.0.2 
+-- semver@5.3.0 
+-- temp@0.8.3 
| `-- rimraf@2.2.8 
+-- tree-kill@1.1.0 
`-- what-the-diff@0.2.0 


(node) warning: possible EventEmitter memory leak detected. 11 error listeners added. Use emitter.setMaxListeners() to increase limit.
Trace
    at TLSSocket.addListener (events.js:239:17)
    at TLSSocket.Readable.on (_stream_readable.js:673:33)
    at Request.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/npm-registry-client/lib/request.js:153:7)
    at emitOne (events.js:77:13)
    at Request.emit (events.js:169:7)
    at ClientRequest.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/request/request.js:823:10)
    at emitOne (events.js:82:20)
    at ClientRequest.emit (events.js:169:7)
    at tickOnSocket (_http_client.js:502:7)
    at onSocketNT (_http_client.js:514:5)
(node) warning: possible EventEmitter memory leak detected. 11 error listeners added. Use emitter.setMaxListeners() to increase limit.
Trace
    at TLSSocket.addListener (events.js:239:17)
    at TLSSocket.Readable.on (_stream_readable.js:673:33)
    at Request.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/npm-registry-client/lib/request.js:153:7)
    at emitOne (events.js:77:13)
    at Request.emit (events.js:169:7)

    at ClientRequest.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/request/request.js:823:10)
    at emitOne (events.js:82:20)
    at ClientRequest.emit (events.js:169:7)
    at tickOnSocket (_http_client.js:502:7)
    at onSocketNT (_http_client.js:514:5)
(node) warning: possible EventEmitter memory leak detected. 11 error listeners added. Use emitter.setMaxListeners() to increase limit.
Trace
    at TLSSocket.addListener (events.js:239:17)
    at TLSSocket.Readable.on (_stream_readable.js:673:33)
    at Request.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/npm-registry-client/lib/request.js:153:7)
    at emitOne (events.js:77:13)
    at Request.emit (events.js:169:7)
    at ClientRequest.<anonymous> (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/request/request.js:823:10)
    at emitOne (events.js:82:20)
    at ClientRequest.emit (events.js:169:7)
    at tickOnSocket (_http_client.js:502:7)
    at onSocketNT (_http_client.js:514:5)
make: *** No rule to make target `../../../../../../../../../../Applications/Atom', needed by `Makefile'.  Stop.
gyp ERR! build error 
gyp ERR! stack Error: `make` failed with exit code: 2
gyp ERR! stack     at ChildProcess.onExit (/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/node-gyp/lib/build.js:276:23)
gyp ERR! stack     at emitTwo (events.js:87:13)
gyp ERR! stack     at ChildProcess.emit (events.js:172:7)
gyp ERR! stack     at Process.ChildProcess._handle.onexit (internal/child_process.js:200:12)
gyp ERR! System Darwin 16.1.0
gyp ERR! command "/Applications/Atom Beta.app/Contents/Resources/app/apm/bin/node" "/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/.bin/node-gyp" "rebuild"
gyp ERR! cwd /private/var/folders/19/fkg_98p137bd8y8r_5b0nz1m0000gn/T/atom-git-package-clone-117011-854-11cp3bh/node_modules/nsfw
gyp ERR! node -v v4.4.5
gyp ERR! node-gyp -v v3.4.0
gyp ERR! not ok 
npm ERR! Darwin 16.1.0
npm ERR! argv "/Applications/Atom Beta.app/Contents/Resources/app/apm/bin/node" "/Applications/Atom Beta.app/Contents/Resources/app/apm/node_modules/npm/bin/npm-cli.js" "--globalconfig" "/Users/iolsen/.atom/.apm/.apmrc" "--userconfig" "/Users/iolsen/.atom/.apmrc" "install" "--runtime=electron" "--target=1.3.13" "--arch=x64"
npm ERR! node v4.4.5
npm ERR! npm  v3.10.5
npm ERR! code ELIFECYCLE

npm ERR! nsfw@1.0.14 install: `node-gyp rebuild`
npm ERR! Exit status 1
npm ERR! 
npm ERR! Failed at the nsfw@1.0.14 install script 'node-gyp rebuild'.
npm ERR! Make sure you have the latest version of node.js and npm installed.
npm ERR! If you do, this is most likely a problem with the nsfw package,
npm ERR! not with npm itself.
npm ERR! Tell the author that this fails on your system:
npm ERR!     node-gyp rebuild
npm ERR! You can get information on how to open an issue for this project with:
npm ERR!     npm bugs nsfw
npm ERR! Or if that isn't available, you can get their info via:
npm ERR!     npm owner ls nsfw
npm ERR! There is likely additional logging output above.

npm ERR! Please include the following file with any support request:
npm ERR!     /private/var/folders/19/fkg_98p137bd8y8r_5b0nz1m0000gn/T/atom

As before, apm update worked fine:

iolsen:~/github/atom/atom (master=)$ apm update
Package Updates Available (1)
└── github dc57ad95 -> fcf47497

Would you like to install these updates? (yes) 

Cloning https://github.com/atom/github.git ✓
Moving github to /Users/iolsen/.atom/packages/github ✓

[smashwilson]

This looks like the same thing as #427. Basically, apm-beta fails to build native extensions when there's whitespace in the path, which is always the case for beta-channel installs.

It's already been fixed in atom/apm#666, but not released. Worth a hotfix do you think?

[iolsen]

Unless I'm missing something, atom/apm#666 is a Windows-only fix?

Once we do have a fix for Mac, I'm 👍 on a hotfix for beta.

[smashwilson]

@iolsen Oh you're right... @damieng's commit only touches .cmd files. I'm guessing that there's a similar fix for the bash scripts... ?

I'll see if I can repro and correct. 🔧

[damieng]

Yeah sorry guys I've only been fixing the Windows areas with spaces in the name - wasn't aware we also had this issue on macOS/Linux.

[smashwilson]

Yeah sorry guys I've only been fixing the Windows areas with spaces in the name - wasn't aware we also had this issue on macOS/Linux.

Turns out I was wrong about this. It's this issue (atom/apm#499), which is fundamentally a node-gyp problem (nodejs/node-gyp#65) which has been open for... four years now.

On one hand, this won't be a one-line hotfix like I was hoping it would. On the other, this is actually breaking beta install of any Atom package that has any native dependency.

It looks like node-gyp lets you interpose custom generators for build files (as a Python module), which means that I should be able to modify the built-in Makefile generator as a vendored file in apm and configure node-gyp to use the patched version instead. That'd let us unbreak apm-beta install without having to wait for PR to node-gyp (then a release, then a version-bump in npm...) to make its way through the pipeline.

[smashwilson]

I have a PR that fixes this now at atom/apm#673. ✨

Just needs tests, then an upstream patch to gyp.

[smashwilson]

Fixed upstream!