fix: a few misc fixes

.pre-commit-config.yaml

@@ -16,9 +16,9 @@ repos:
         language: python
         types: [python]
 
-      # - id: mypy
-      #   name: mypy
-      #   entry: mypy
-      #   language: system
-      #   types: [python]
-      #   args: [--strict, --ignore-missing-imports, --exclude=tests]
+      - id: mypy
+        name: mypy
+        entry: mypy
+        language: system
+        types: [python]
+        args: [--strict, --ignore-missing-imports, --exclude=tests]

docs/stylesheets/extra.css

@@ -1,14 +1,24 @@
 html {
-    font-size: 16px;
-  }
+  font-size: 18px;
+}
+
 
-
 h1 {
-  font-weight: 600 !important;
-  color: #333 !important;
+font-weight: 600 !important;
+color: #333 !important;
+}
+
+[data-md-color-scheme="slate"] h1 {
+font-weight: 600 !important;
+color: #d7d7d7 !important;
 }
 
 h2 {
-  font-weight: 600 !important;
-  color: #333 !important;
+font-weight: 600 !important;
+color: #333 !important;
+}
+
+[data-md-color-scheme="slate"] h2 {
+font-weight: 600 !important;
+color: #d7d7d7 !important;
 }

mkdocs.yml

@@ -1,8 +1,27 @@
 site_name: Batista Template Docs
+repo_url: https://github.com/batistagroup/python-template
+repo_name: batistagroup/python-template
+copyright: CC-BY 4.0 © 2025 Batista Group
 theme:
   name: material
   features:
     - content.code.copy
+    - navigation.footer
+  palette:
+      # Palette toggle for light mode
+    - media: "(prefers-color-scheme: light)"
+      scheme: default
+      toggle:
+        icon: material/brightness-7
+        name: Switch to dark mode
+
+    # Palette toggle for dark mode
+    - media: "(prefers-color-scheme: dark)"
+      scheme: slate
+      toggle:
+        icon: material/brightness-4
+        name: Switch to light mode
+
 
 extra_css:
 - stylesheets/extra.css
@@ -22,3 +41,5 @@ markdown_extensions:
   - def_list
   - pymdownx.tasklist:
       custom_checkbox: true
+  - admonition
+  - pymdownx.details

pyproject.toml

@@ -6,7 +6,6 @@ readme = "README.md"
 requires-python = ">=3.12"
 dependencies = [
     "numpy>=2.2.3",
-    "tomli>=2.2.1",
     "tqdm>=4.67.1",
 ]
 authors = [{ name = "Anton Morgunov", email = "anton@ischemist.com" }]
@@ -18,7 +17,6 @@ Issues = "https://github.com/batistagroup/batistatemplate/issues"
 
 
 [tool.setuptools]
-packages = ["batistatemplate"]
 package-dir = { "" = "src" }
 
 
@@ -57,24 +55,3 @@ lint.select = [
     "SIM", # flake8-simplify
     "I",   # isort
 ]
-
-
-# Section below is pretty standard logger configuration
-
-[tool.logging]
-version = 1
-disable_existing_loggers = false
-
-[tool.logging.formatters.standard]
-format = "%(asctime)s [%(levelname)s] %(name)s (%(module)s:%(lineno)d): %(message)s"
-datefmt = "%Y-%m-%d %H:%M:%S"
-
-[tool.logging.handlers.console]
-class = "logging.StreamHandler"
-formatter = "standard"
-stream = "ext://sys.stdout"
-
-[tool.logging.loggers.batistatemplate]
-handlers = ["console"]
-propagate = false
-level = "INFO"

src/batistatemplate/utils/logging_config.py

@@ -1,60 +1,52 @@
 import logging
 import logging.config
 import os
-from pathlib import Path
-
-import tomli
+from typing import Any
+
+# --- Hardcoded Configuration ---
+LOGGING_CONFIG: dict[str, Any] = {
+    "version": 1,
+    "disable_existing_loggers": False,
+    "formatters": {
+        "standard": {
+            "format": "%(asctime)s [%(levelname)s] %(name)s: %(message)s",
+            "datefmt": "%Y-%m-%d %H:%M:%S",
+        }
+    },
+    "handlers": {
+        "console": {
+            "class": "logging.StreamHandler",
+            "formatter": "standard",
+            "stream": "ext://sys.stdout",
+        }
+    },
+    "loggers": {
+        "batistatemplate": {
+            "handlers": ["console"],
+            "propagate": False,
+            "level": "INFO",  # Default level
+        }
+    },
+}
+# --- End Hardcoded Configuration ---
 
 
 def setup_logging() -> None:
-    """Configures logging for the application.
-
-    Reads the logging configuration from the 'pyproject.toml' file
-    and applies it using `logging.config.dictConfig`.
-
-    The log level can be overridden by setting the
-    'BATISTATEMPLATE_LOG_LEVEL' environment variable. If the environment
-    variable is not set or set to an invalid level, it defaults to 'INFO'.
-
-    Raises:
-        FileNotFoundError: If 'pyproject.toml' is not found.
-        tomli.TOMLDecodeError: If 'pyproject.toml' is not a valid TOML file.
-        KeyError: If the 'tool.logging' section is missing in 'pyproject.toml'.
-    """
-    # Construct the path to pyproject.toml, assuming it's 3 levels up from this file.
-    pyproject_path = Path(__file__).parents[3] / "pyproject.toml"
-
-    try:
-        with open(pyproject_path, "rb") as f:
-            config = tomli.load(f)
-    except FileNotFoundError as e:
-        raise FileNotFoundError(f"pyproject.toml not found at {pyproject_path}: {e}") from e
-    except tomli.TOMLDecodeError as e:
-        raise tomli.TOMLDecodeError(f"Failed to decode pyproject.toml: {e}") from e
-
-    # Determine the log level:
-    # 1. Check for BATISTATEMPLATE_LOG_LEVEL environment variable.
-    # 2. Default to 'INFO' if not set or invalid.
-    log_level_env = os.getenv("BATISTATEMPLATE_LOG_LEVEL", "INFO").upper()
+    """Setup logging configuration from hardcoded dict with environment variable override"""
+
+    # Get log level from environment variable, default to INFO if not set
+    log_level = os.getenv("BATISTATEMPLATE_LOG_LEVEL", "INFO").upper()
 
+    # Validate the log level
     valid_levels = {"DEBUG", "INFO", "WARNING", "ERROR", "CRITICAL"}
-    if log_level_env not in valid_levels:
-        print(f"Invalid log level '{log_level_env}' from environment, defaulting to INFO")
-        log_level = "INFO"
-    else:
-        log_level = log_level_env
-
-    try:
-        # Extract logging configuration from pyproject.toml
-        logging_config = config["tool"]["logging"]
-    except KeyError as e:
-        raise KeyError(f"'tool.logging' section not found in pyproject.toml: {e}") from e
-
-    # Override the log level specified in pyproject.toml with the determined log level.
-    logging_config["loggers"]["batistatemplate"]["level"] = log_level
-
-    # Configure logging using the dictionary configuration.
-    logging.config.dictConfig(logging_config)
+    if log_level not in valid_levels:
+        print(f"Invalid log level {log_level}, defaulting to INFO")
+        log_level = "INFO"  # Make sure to reset if invalid
+
+    # Override the log level in the copied config
+    LOGGING_CONFIG["loggers"]["batistatemplate"]["level"] = log_level
+
+    logging.config.dictConfig(LOGGING_CONFIG)
 
 
 # Get the logger for the 'batistatemplate' application.