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260 specific consequence type filters for tert promoter in proportion of mutated epithelium#261

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FerriolCalvet merged 7 commits intodevfrom
260-specific-consequence-type-filters-for-tert-promoter-in-proportion-of-mutated-epithelium
Mar 20, 2025
Merged

260 specific consequence type filters for tert promoter in proportion of mutated epithelium#261
FerriolCalvet merged 7 commits intodevfrom
260-specific-consequence-type-filters-for-tert-promoter-in-proportion-of-mutated-epithelium

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@koszulordie
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mutgenomes_driver_priority.py command-line has a new option --recoded-genes that accepts comma-separated gene names for which all consequence types will be recoded to "missense"
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tested and all works well

@FerriolCalvet FerriolCalvet merged commit 7636d10 into dev Mar 20, 2025
@FerriolCalvet FerriolCalvet deleted the 260-specific-consequence-type-filters-for-tert-promoter-in-proportion-of-mutated-epithelium branch March 22, 2025 22:21
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Specific consequence type filters for TERT promoter in proportion of mutated epithelium

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