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Fix incorrect plotting of mutational profile#263

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FerriolCalvet merged 3 commits intodevfrom
95-fix-profile-plot
Mar 23, 2025
Merged

Fix incorrect plotting of mutational profile#263
FerriolCalvet merged 3 commits intodevfrom
95-fix-profile-plot

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Currently we were only plotting the relative mutation probabilities of each trinucleotide change, while usually the mutational profile is plotted as the % of SBS of each trinucleotide.

From now on we will be plotting three versions of the plot:

  • Same as now, relative mutation probabilities or each trinucleotide change
  • % of SBS of each trinucleotide change of the mutations observed in our panel
  • % of SBS of each trinucleotide change of the mutations we would observe in one WGS if mutations were occuring with the same probabilities as they occur in our sequenced panel

@FerriolCalvet FerriolCalvet linked an issue Mar 23, 2025 that may be closed by this pull request
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@FerriolCalvet FerriolCalvet merged commit cee885a into dev Mar 23, 2025
@FerriolCalvet FerriolCalvet deleted the 95-fix-profile-plot branch March 23, 2025 12:34
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Compute profile should output WGS renormalized profile

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