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dev/muts2sbs#52

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FerriolCalvet merged 4 commits intomainfrom
dev/muts2sbs
Feb 19, 2024
Merged

dev/muts2sbs#52
FerriolCalvet merged 4 commits intomainfrom
dev/muts2sbs

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Annotate mutations with their proportion of being cause by each SBS

FerriolCalvet and others added 4 commits February 16, 2024 22:43
- new Mutations_n_sbs.py script
- new module mutations2sbs
- rename file of mutation decomposed probabilities
- add sigprofiler context format to MAF
- modify subworkflows and main workflow accordingly
- New structure first concat all and split by groups
- Then annotate each group with the corresponding profile information.
- No distinction between samples of the same group.
- Turn on and off running each specific profiles
@FerriolCalvet FerriolCalvet merged commit a4e3780 into main Feb 19, 2024
@FerriolCalvet FerriolCalvet deleted the dev/muts2sbs branch March 20, 2024 13:28
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