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bigyambat/README.md
  • 👋 Hi, I’m @bigyambat
  • 👀 I’m interested in Biomedical Informatics.
  • 🌱 I’m currently studying for a Bioinformatics Masters at USC Keck School of Medicine
  • 💞️ I’m looking to collaborate on working on bioinformatics projects and learning new computational skills
  • 📫 Reach me through email at bigyambat@gmail.com

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  1. GWENA2GeneOntology GWENA2GeneOntology Public

    Bionformatics Tool to Convert Gene Co-expression Network Analysis to Gene Ontology Visualizations

    Python

  2. collaborativebioinformatics/IsoSV collaborativebioinformatics/IsoSV Public

    Python 4 3

  3. RNA-Seq_Pipeline RNA-Seq_Pipeline Public

    Nextflow Pipeline Script for RNA-Seq Analysis using NS2000 and MiSeq Sequencers

    Shell

  4. scRNA-Seq-Mini-Analysis scRNA-Seq-Mini-Analysis Public

    This repo provides a fast, end-to-end, reproducible pipeline using Cell Ranger, Seurat (R), and FLAIR.

    HTML

  5. BioStream BioStream Public

    Node Based Integrated Development Environment (IDE) that combines the familiarity of RStudio with a node interface for visualizing and executing workflows

    TypeScript

  6. MSBuddy-Annotation-Pipeline MSBuddy-Annotation-Pipeline Public

    A Nextflow pipeline for automated mass spectrometry annotation and quality control reporting using MSBuddy.

    Python