Skip to content

Conversation

@Sahilbhatane
Copy link
Collaborator

@Sahilbhatane Sahilbhatane commented Dec 22, 2025

Related Issue

Closes #204

Summary

  • Removed unnecessary files and folder, Moved files to there appropriate folder
  • changed automation slightly.
  • moved "test/*" to "../tests/" directory for management
  • updated file's path to moved path.

test passes but still needs manual testing - (check commands.md file in /docs for manual testing each command) -

image

Checklist

  • Tests pass (pytest tests/)
  • PR title format: [#204 ] Description
  • MVP label added if closing MVP issue

Summary by CodeRabbit

Release Notes

  • New Features

    • Added notify command for desktop notification configuration and test messaging.
    • Introduced fake provider support for offline testing and development.
  • Improvements

    • Enhanced dependency verification with detailed installation guidance.
    • Updated test infrastructure for improved CI/Docker integration.
  • Documentation

    • Added comprehensive CLI Commands Reference guide.
    • Updated contributor documentation.
  • Chores

    • Removed legacy automation scripts and internal documentation.
    • Cleaned up issue templates and workflows.

✏️ Tip: You can customize this high-level summary in your review settings.

@coderabbitai
Copy link
Contributor

coderabbitai bot commented Dec 22, 2025

Caution

Review failed

The pull request is closed.

Walkthrough

Large-scale repository cleanup removing automation scripts, task documentation, and project-level guidance files. Restructures test directories from test/ to tests/, updates CI/CD workflows, adds fake provider support to LLM components, introduces CLI notification management, enhances dependency checking, and refines GitHub issue templates with default assignees.

Changes

Cohort / File(s) Summary
Automation & Deployment Scripts Removal
scripts/automation/cortex-master-*.sh, scripts/automation/manage_cortex_prs.sh, scripts/automation/focus-on-mvp.sh, scripts/deployment/*, scripts/github/merge-mike-prs.sh, scripts/github/organize-issues.sh, scripts/github/review-contributor-prs.sh, scripts/github/setup-github-automation.sh, scripts/recruit-ready.sh, scripts/fetch-fork-emails.sh
Deleted 16 Bash automation scripts for PR management, issue coordination, bounty tracking, repository status reporting, and contributor onboarding. Scripts provided menu-driven interfaces, GitHub CLI workflows, and deployment orchestration.
Task & Process Documentation Removal
.claude/tasks/*, NEXT_STEPS.md, contribution.md, test.md
Removed 8 documentation files including Claude task definitions (commit, create PR/issue, review PR, merge PR, pay bounty, check repo status), project roadmap/next steps, contributor guidelines, and testing strategy documentation.
GitHub Workflow Updates
.github/workflows/automation.yml, .github/workflows/ci.yml, .github/workflows/phase-trigger.yml, .github/workflows/welcome-fork.yml
Updated automation.yml with editable install mode, pytest-timeout, environment API keys, ruff linting integration, and Codecov Python 3.11 conditional. Removed phase-trigger.yml milestone automation and welcome-fork.yml fork event handling. Refined ci.yml coverage ignore paths.
GitHub Issue Templates
.github/ISSUE_TEMPLATE/bug_report.md, .github/ISSUE_TEMPLATE/feature_request.md
Added default assignees ("suyashd999, mikejmorgan-ai") to both templates. Removed "Bounty interest" section and adjusted formatting in feature_request.md.
Test Directory Restructuring
test/tests/, Contributing.md, test/run_all_tests.py, test_parallel_llm.py, tests/integration/test_end_to_end.py, tests/integration/docker_utils.py, tests/test_cli_extended.py
Migrated tests from test/ to tests/ directory. Updated Contributing.md pytest paths. Removed test/run_all_tests.py and test_parallel_llm.py. Updated test_end_to_end.py to use PIP_BOOTSTRAP_DEV and Docker-based pytest. Renamed TestCortexCLI to TestCortexCLIExtended. Enhanced docker_utils.py with UTF-8 encoding and error handling.
Provider & LLM Support
cortex/cli.py, cortex/llm/interpreter.py, cortex/dependency_check.py
Added "fake" provider support to CLI and CommandInterpreter for testing/offline scenarios. Introduced CortexCLI.notify() command for desktop notification configuration. Enhanced dependency checking with formatted installation instructions and REQUIRED_DEPENDENCIES list.
Documentation & Formatting
docs/COMMANDS.md, examples/parallel_llm_demo.py, cortex/llm_router.py, nginx-demo-output.txt
Added comprehensive COMMANDS.md CLI reference. Minor whitespace/formatting adjustments in example code and llm_router.py. Removed nginx-demo-output.txt demo log.
Minor Test Updates
test/integration/__init__.py, test/test_smart_stacks.py, tests/run_all_tests.py, tests/test_llm_router.py
Removed module docstring from integration __init__.py, deleted test_smart_stacks.py test content, removed tests/run_all_tests.py, reformatted test call in test_llm_router.py.

Sequence Diagram(s)

Conditions for sequence diagram generation not met. This PR consists primarily of file deletions, documentation removal, directory restructuring, and isolated feature additions without multi-component interaction flows.

Estimated code review effort

🎯 4 (Complex) | ⏱️ ~45 minutes

Rationale: Heterogeneous changes spanning multiple domains (CI/CD, test structure, LLM provider support, CLI commands, documentation). While individual deletions are straightforward, the breadth requires verifying consistency across test migrations, understanding new fake provider integration paths, validating CLI notify command implementation, ensuring dependency checking aligns with updated workflow, and confirming issue template assignee defaults don't create unintended assignment patterns. No single cohort dominates; logic density moderate but file count and change variety elevate complexity.

Possibly related PRs

Suggested labels

enhancement, refactor, cleanup

Suggested reviewers

  • mikejmorgan-ai

Pre-merge checks and finishing touches

❌ Failed checks (2 warnings, 1 inconclusive)
Check name Status Explanation Resolution
Out of Scope Changes check ⚠️ Warning The PR includes extensive changes beyond the stated scope: deletion of 50+ automation/deployment scripts, removal of workflow files (.github/workflows), changes to issue templates, removal of documentation files (.claude/tasks/), and removal of test files, which extend beyond the focused file restructuring objective. Consider separating bulk file deletions (automation scripts, workflows, .claude/tasks) from the core restructuring PR, or explicitly document the rationale for their removal in the PR description and ensure they align with project goals.
Docstring Coverage ⚠️ Warning Docstring coverage is 50.00% which is insufficient. The required threshold is 80.00%. You can run @coderabbitai generate docstrings to improve docstring coverage.
Title check ❓ Inconclusive The title 'Repository restructured and removed unnecessary files' is vague and generic, using non-descriptive terms that don't convey specific information about the changeset. Provide a more specific title that captures the main structural changes, such as 'Restructure repository: move files to docs and scripts directories, consolidate test folder' to clearly indicate what was reorganized.
✅ Passed checks (2 passed)
Check name Status Explanation
Description check ✅ Passed The description addresses the linked issue objectives and includes required sections (Related Issue, Summary, Checklist), though the summary contains informal language and formatting inconsistencies, and checklist items lack MVP label despite some items being related to structural management.
Linked Issues check ✅ Passed The PR successfully addresses issue #204 by moving script files to scripts directory, documentation to docs directory, consolidating test directories, and updating related paths throughout the codebase.

📜 Recent review details

Configuration used: defaults

Review profile: CHILL

Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between 7a90b60 and 4f4cd6c.

📒 Files selected for processing (10)
  • .github/workflows/automation.yml
  • cortex/cli.py
  • cortex/dependency_check.py
  • cortex/llm/interpreter.py
  • cortex/llm_router.py
  • docs/COMMANDS.md
  • examples/parallel_llm_demo.py
  • tests/integration/docker_utils.py
  • tests/integration/test_end_to_end.py
  • tests/test_llm_router.py

Thanks for using CodeRabbit! It's free for OSS, and your support helps us grow. If you like it, consider giving us a shout-out.

❤️ Share

Comment @coderabbitai help to get the list of available commands and usage tips.

Suyashd999
Suyashd999 previously approved these changes Dec 22, 2025
Copy link
Contributor

Copilot AI left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Pull request overview

This PR restructures the repository by consolidating test directories and removing unnecessary automation/script files to improve organization and maintainability.

Key Changes:

  • Consolidated test directories: moved files from test/ to tests/ for consistency
  • Updated all test path references in documentation and CI configuration
  • Removed extensive collection of automation scripts, bounty tracking files, and deprecated documentation
  • Added comprehensive COMMANDS.md documentation

Reviewed changes

Copilot reviewed 48 out of 49 changed files in this pull request and generated no comments.

Show a summary per file
File Description
tests/test_cli_extended.py Added docstring and renamed test class for clarity
tests/run_all_tests.py Removed (redundant with pytest)
tests/integration/test_end_to_end.py Updated test command from unittest to pytest
tests/integration/docker_utils.py New file - extracted Docker utilities for integration tests
test_parallel_llm.py Removed test script from root
test/test_smart_stacks.py Removed (moved to tests/)
test/run_all_tests.py Removed old test runner
test/integration/init.py Removed old integration test init
Contributing.md Updated test paths from test/ to tests/
COMMANDS.md Added comprehensive CLI command reference documentation
.github/workflows/ci.yml Updated pytest paths to exclude old test/ directory
scripts/* Removed 20+ automation, deployment, and GitHub management scripts
Multiple .md files Removed deprecated documentation files
Multiple .csv/.txt files Removed bounty tracking and output files
.claude/tasks/* Removed Claude task automation files
.github/workflows/* Removed redundant workflow files

💡 Add Copilot custom instructions for smarter, more guided reviews. Learn how to get started.

Copy link
Contributor

@coderabbitai coderabbitai bot left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Actionable comments posted: 0

🧹 Nitpick comments (2)
COMMANDS.md (2)

48-48: Consider adding blank lines around tables for markdown compliance.

Multiple tables in this documentation lack surrounding blank lines, which violates markdown best practices (MD058). While this doesn't affect rendering in most parsers, it improves consistency and compatibility.

Example fix for Line 48
 **Options:**
+
 | Flag | Description |
 |------|-------------|
 | `--dry-run` | Show commands without executing (safe preview) |
 | `--execute` | Actually run the installation commands |
 | `--parallel` | Enable parallel execution for multi-step installs |
+
 **Examples:**

Also applies to: 147-147, 180-180, 209-209, 216-216, 254-254, 275-275, 330-330


440-442: Wrap bare URLs in angle brackets for markdown compliance.

The URLs at the end of the document should be wrapped in angle brackets to comply with markdown best practices (MD034).

Proposed fix
-- **Documentation**: https://cortexlinux.com/docs
-- **Discord**: https://discord.gg/uCqHvxjU83
-- **GitHub**: https://github.com/cortexlinux/cortex
+- **Documentation**: <https://cortexlinux.com/docs>
+- **Discord**: <https://discord.gg/uCqHvxjU83>
+- **GitHub**: <https://github.com/cortexlinux/cortex>
📜 Review details

Configuration used: defaults

Review profile: CHILL

Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between f6bfa49 and 7a90b60.

⛔ Files ignored due to path filters (3)
  • bounties_owed.csv is excluded by !**/*.csv
  • bounties_paid.csv is excluded by !**/*.csv
  • data/bounty-payments.csv is excluded by !**/*.csv
📒 Files selected for processing (46)
  • .claude/tasks/README.md
  • .claude/tasks/check-repo-status.md
  • .claude/tasks/commit.md
  • .claude/tasks/create-issue.md
  • .claude/tasks/create-pr.md
  • .claude/tasks/merge-pr.md
  • .claude/tasks/pay-bounty.md
  • .claude/tasks/review-pr.md
  • .github/ISSUE_TEMPLATE/bug_report.md
  • .github/ISSUE_TEMPLATE/feature_request.md
  • .github/workflows/automation.yml
  • .github/workflows/ci.yml
  • .github/workflows/phase-trigger.yml
  • .github/workflows/welcome-fork.yml
  • COMMANDS.md
  • Contributing.md
  • NEXT_STEPS.md
  • contribution.md
  • nginx-demo-output.txt
  • scripts/automation/cortex-master-automation.sh
  • scripts/automation/cortex-master-pr-creator.sh
  • scripts/automation/cortex-master-quarterback.sh
  • scripts/automation/cortex-master-update.sh
  • scripts/automation/cortex-master.sh
  • scripts/automation/cortex-pr-dashboard.sh
  • scripts/automation/focus-on-mvp.sh
  • scripts/automation/manage_cortex_prs.sh
  • scripts/deployment/audit_cortex_status.sh
  • scripts/deployment/deploy_jesse_system.sh
  • scripts/deployment/setup_and_upload.sh
  • scripts/deployment/upload_issue_34.sh
  • scripts/fetch-fork-emails.sh
  • scripts/github/merge-mike-prs.sh
  • scripts/github/organize-issues.sh
  • scripts/github/review-contributor-prs.sh
  • scripts/github/setup-github-automation.sh
  • scripts/recruit-ready.sh
  • test.md
  • test/integration/__init__.py
  • test/run_all_tests.py
  • test/test_smart_stacks.py
  • test_parallel_llm.py
  • tests/integration/docker_utils.py
  • tests/integration/test_end_to_end.py
  • tests/run_all_tests.py
  • tests/test_cli_extended.py
💤 Files with no reviewable changes (38)
  • .github/workflows/welcome-fork.yml
  • scripts/fetch-fork-emails.sh
  • .claude/tasks/README.md
  • tests/run_all_tests.py
  • .github/workflows/automation.yml
  • scripts/automation/manage_cortex_prs.sh
  • test/integration/init.py
  • scripts/github/merge-mike-prs.sh
  • scripts/deployment/upload_issue_34.sh
  • .claude/tasks/review-pr.md
  • scripts/automation/focus-on-mvp.sh
  • .claude/tasks/check-repo-status.md
  • scripts/github/organize-issues.sh
  • test.md
  • NEXT_STEPS.md
  • test/run_all_tests.py
  • .claude/tasks/create-pr.md
  • scripts/automation/cortex-master.sh
  • scripts/automation/cortex-master-quarterback.sh
  • .claude/tasks/merge-pr.md
  • .claude/tasks/commit.md
  • .claude/tasks/pay-bounty.md
  • scripts/automation/cortex-pr-dashboard.sh
  • scripts/recruit-ready.sh
  • scripts/deployment/deploy_jesse_system.sh
  • scripts/deployment/audit_cortex_status.sh
  • scripts/automation/cortex-master-pr-creator.sh
  • test_parallel_llm.py
  • scripts/github/setup-github-automation.sh
  • contribution.md
  • scripts/deployment/setup_and_upload.sh
  • scripts/automation/cortex-master-update.sh
  • scripts/automation/cortex-master-automation.sh
  • nginx-demo-output.txt
  • .github/workflows/phase-trigger.yml
  • .claude/tasks/create-issue.md
  • test/test_smart_stacks.py
  • scripts/github/review-contributor-prs.sh
🧰 Additional context used
📓 Path-based instructions (2)
**/*.py

📄 CodeRabbit inference engine (AGENTS.md)

**/*.py: Follow PEP 8 style guide
Type hints required in Python code
Docstrings required for all public APIs

Files:

  • tests/test_cli_extended.py
  • tests/integration/test_end_to_end.py
tests/**/*.py

📄 CodeRabbit inference engine (AGENTS.md)

Maintain >80% test coverage for pull requests

Files:

  • tests/test_cli_extended.py
  • tests/integration/test_end_to_end.py
🧠 Learnings (3)
📚 Learning: 2025-12-11T12:03:24.071Z
Learnt from: CR
Repo: cortexlinux/cortex PR: 0
File: AGENTS.md:0-0
Timestamp: 2025-12-11T12:03:24.071Z
Learning: Applies to tests/**/*.py : Maintain >80% test coverage for pull requests

Applied to files:

  • .github/workflows/ci.yml
  • Contributing.md
📚 Learning: 2025-12-11T12:03:24.071Z
Learnt from: CR
Repo: cortexlinux/cortex PR: 0
File: AGENTS.md:0-0
Timestamp: 2025-12-11T12:03:24.071Z
Learning: All tests must pass before merging pull requests

Applied to files:

  • Contributing.md
📚 Learning: 2025-12-11T12:03:24.071Z
Learnt from: CR
Repo: cortexlinux/cortex PR: 0
File: AGENTS.md:0-0
Timestamp: 2025-12-11T12:03:24.071Z
Learning: Documentation required for new features

Applied to files:

  • .github/ISSUE_TEMPLATE/feature_request.md
🧬 Code graph analysis (1)
tests/integration/test_end_to_end.py (1)
tests/integration/docker_utils.py (1)
  • succeeded (20-22)
🪛 markdownlint-cli2 (0.18.1)
COMMANDS.md

48-48: Tables should be surrounded by blank lines

(MD058, blanks-around-tables)


147-147: Tables should be surrounded by blank lines

(MD058, blanks-around-tables)


180-180: Tables should be surrounded by blank lines

(MD058, blanks-around-tables)


209-209: Tables should be surrounded by blank lines

(MD058, blanks-around-tables)


216-216: Tables should be surrounded by blank lines

(MD058, blanks-around-tables)


254-254: Tables should be surrounded by blank lines

(MD058, blanks-around-tables)


275-275: Tables should be surrounded by blank lines

(MD058, blanks-around-tables)


330-330: Tables should be surrounded by blank lines

(MD058, blanks-around-tables)


440-440: Bare URL used

(MD034, no-bare-urls)


441-441: Bare URL used

(MD034, no-bare-urls)


442-442: Bare URL used

(MD034, no-bare-urls)

⏰ Context from checks skipped due to timeout of 90000ms. You can increase the timeout in your CodeRabbit configuration to a maximum of 15 minutes (900000ms). (1)
  • GitHub Check: Agent
🔇 Additional comments (9)
.github/workflows/ci.yml (1)

81-81: LGTM! Test path updates align with directory restructuring.

The test directory path updates from test/ to tests/ are correct and consistent with the PR's repository restructuring objectives.

Also applies to: 87-87

Contributing.md (1)

82-82: LGTM! Documentation updated to reflect new test directory structure.

All test path references have been consistently updated from test/ to tests/ throughout the contributing guide, maintaining documentation accuracy.

Also applies to: 103-103, 140-140, 261-261, 264-264, 267-267

.github/ISSUE_TEMPLATE/bug_report.md (1)

6-6: LGTM! Default assignees improve issue triage.

Adding default assignees to the bug report template ensures that issues receive prompt attention from maintainers.

tests/integration/test_end_to_end.py (2)

112-112: LGTM! Migration to pytest-based test execution.

The change from the custom test runner (test/run_all_tests.py) to pytest is a best practice improvement that aligns with standard Python testing workflows and the broader test suite restructuring in this PR.


116-116: Assertion update matches pytest output format.

The assertion now correctly checks for "passed" (case-insensitive) in the output, which aligns with pytest's standard output format. The case-insensitive check provides good flexibility for different pytest output variations.

tests/test_cli_extended.py (2)

1-6: LGTM! Clear documentation header added.

The extended docstring header provides helpful context about the test file's origin and purpose.


17-18: Class rename improves clarity.

The rename from TestCortexCLI to TestCortexCLIExtended clearly distinguishes this extended test suite with thorough mocking from the basic test class. No external references to the renamed class exist, and the change is isolated to this file.

.github/ISSUE_TEMPLATE/feature_request.md (2)

6-6: LGTM! Default assignees improve issue triage.

Adding default assignees to the feature request template ensures that feature requests receive prompt attention from maintainers, matching the pattern in the bug report template.


23-23: Minor formatting adjustment is appropriate.

Removing the list marker from this line makes it read more naturally as a descriptive note rather than a list item.

@sonarqubecloud
Copy link

@Suyashd999 Suyashd999 marked this pull request as ready for review December 23, 2025 05:56
@Suyashd999 Suyashd999 self-requested a review December 23, 2025 05:57
@Sahilbhatane Sahilbhatane merged commit 287a353 into cortexlinux:main Dec 23, 2025
12 of 13 checks passed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

File structuring and management.

2 participants