patter: Particle Filters, Smoothers and Samplers for Animal Movement Modelling

[basille]

Are you the author of the package?

No

Is the package on a specific repository?

GitHub

Please provide the URL of the package repository

https://github.com/edwardlavender/patter

Is there a dedicated website for the documentation (e.g. a pkgdown website)?

https://edwardlavender.github.io/patter/

If you are the author of the package, does it pass CRAN check tests?

I don't know

Additional information

patter provides particle filtering, smoothing and sampling algorithms for animal movement modelling, with a focus on passive acoustic telemetry systems (marine environments). It works well with ancillary data, for instance depth.

The package would fit in:

• Analysis > Path reconstruction (pf_filter())
• Analysis > Space and habitat use characterization (map_hr_*(), map_pou() and map_dens())

See also:

• Lavender, E., Scheidegger, A., Albert, C., Biber, S. W., Illian, J., Thorburn, J., Smout, S., & Moor, H. (2025). Particle algorithms for animal movement modelling in receiver arrays. Methods in Ecology and Evolution, 00, 1–12. https://doi.org/10.1111/2041-210X.70028
• Lavender, E., Scheidegger, A., Albert, C., Biber, S. W., Illian, J., Thorburn, J., Smout, S., & Moor, H. (2025). patter: Particle algorithms for animal tracking in R and Julia. Methods in Ecology and Evolution, 00, 1–8. https://doi.org/10.1111/2041-210X.70029
• Lavender, E., Scheidegger, A., Albert, C., Biber, S. W., Brodersen, J., Aleynik, D., Cole, G., Dodd, J., Wright, P. J., Illian, J., James, M., Smout, S., Thorburn, J., & Moor, H. (2025). Animal tracking with particle algorithms for conservation. bioRxiv. https://doi.org/10.1101/2025.02.13.638042