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dependabot merged 2 commits into from
Oct 28, 2025
Merged

Bump the python-packages group across 1 directory with 9 updates #385

dependabot merged 2 commits into from
Oct 28, 2025

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@dependabot dependabot bot commented on behalf of github Oct 27, 2025

Bumps the python-packages group with 9 updates in the / directory:

Package From To
pyarrow 21.0.0 22.0.0
cloudpathlib 0.22.0 0.23.0
parsl 2025.9.22 2025.10.20
botocore 1.40.45 1.40.59
pillow 11.3.0 12.0.0
jupyterlab 4.4.9 4.4.10
isort 6.1.0 7.0.0
jupytext 1.17.3 1.18.1
myst-parser 3.0.1 4.0.1

Updates pyarrow from 21.0.0 to 22.0.0

Release notes

Sourced from pyarrow's releases.

Apache Arrow 22.0.0

Release Notes URL: https://arrow.apache.org/release/22.0.0.html

Apache Arrow 22.0.0 RC1

Release Notes: Release Candidate: 22.0.0 RC1

Apache Arrow 22.0.0 RC0

Release Notes: Release Candidate: 22.0.0 RC0

Commits

Updates cloudpathlib from 0.22.0 to 0.23.0

Release notes

Sourced from cloudpathlib's releases.

v0.23.0

  • Added support for Python 3.14 (Issue #529, PR #530)
    • Changed CloudPath.copy to have the first parameter named target instead of destination and added new follow_symlinks and preserve_metadata kwargs. Breaking change for users that relied on the first parameter being named destination instead of target.
    • Added CloudPath.copy_into to copy a file or directory into another file or directory.
    • Added CloudPath.move to move a file or directory to another location.
    • Added CloudPath.move_into to move a file or directory into another file or directory.
    • Added CloudPathInfo and CloudPath.info to get information about a file or directory.
    • Added additional no-op kwargs to mkdir, touch, glob, rglob, stat to match pathlib.
Changelog

Sourced from cloudpathlib's changelog.

v0.23.0 (2025-10-07)

  • Added support for Python 3.14 (Issue #529, PR #530)
    • Changed CloudPath.copy to have the first parameter named target instead of destination and added new follow_symlinks and preserve_metadata kwargs. Breaking change for users that relied on the first parameter being named destination instead of target.
    • Added CloudPath.copy_into to copy a file or directory into another file or directory.
    • Added CloudPath.move to move a file or directory to another location.
    • Added CloudPath.move_into to move a file or directory into another file or directory.
    • Added CloudPathInfo and CloudPath.info to get information about a file or directory.
    • Added additional no-op kwargs to mkdir, touch, glob, rglob, stat to match pathlib.
Commits

Updates parsl from 2025.9.22 to 2025.10.20

Commits
  • 24d2a6f Implement exception version of complete_task_result factorisation (#4006)
  • 341994e Refactor failure states collection (#4009)
  • 9101815 Remove bash app exception return code report that is constant None (#4008)
  • 96a6a01 Collapse two nested ifs into a single multiway if (#4005)
  • 975adcf Remove connected workers call in strategy (#3991)
  • 0685765 Don't strategize executors in bad state (#3994)
  • c14b729 Make dependency failure handling more consistent (#4004)
  • cb9556e Pull more completion code into _complete_task and rename (#4001)
  • 48d652b Replace an always-true if with an assert (#4002)
  • e1e4bd1 Test correct increase in dep_fail count (#4003)
  • Additional commits viewable in compare view

Updates botocore from 1.40.45 to 1.40.59

Commits

Updates pillow from 11.3.0 to 12.0.0

Release notes

Sourced from pillow's releases.

12.0.0

https://pillow.readthedocs.io/en/stable/releasenotes/12.0.0.html

Removals

Deprecations

Documentation

Dependencies

... (truncated)

Commits

Updates jupyterlab from 4.4.9 to 4.4.10

Release notes

Sourced from jupyterlab's releases.

v4.4.10

4.4.10

(Full Changelog)

Bugs fixed

Maintenance and upkeep improvements

Documentation improvements

Contributors to this release

(GitHub contributors page for this release)

@​andrii-i | @​arjxn-py | @​Darshan808 | @​github-actions | @​hxrshxz | @​jtpio | @​jupyterlab-probot | @​krassowski | @​lumberbot-app | @​martinRenou | @​meeseeksmachine

Commits
  • a4e885c [ci skip] Publish 4.4.10
  • 58c8b82 Backport PR #18019: Fix ObservableList.removeValue behaviour: if item isn't...
  • fef0b41 Backport PR #17797: Fix highlighting search on output cells and previous matc...
  • 0a22bdf Backport PR #17981: Fix spurious scrollbar in output area due to prompt overl...
  • e5034ac Backport PR #17982: Fix race condition renaming unnamed files on first save (...
  • 28d76c0 Backport PR #17992: Bandaid: pin ipykernel on CI to pre-7.0 (#17995)
  • 21e0f10 Backport PR #17983: Update JupyterCon 2025 announcement links (#17989)
  • 55f0f1d Backport PR #17949: Fix empty whitespace after large cell rendering (#17968)
  • 86a9e8d Backport PR #17953: Add cross-references to API reference, fix missing packag...
  • 07ae5fe Fix examples on 4.4.x (#17963)
  • Additional commits viewable in compare view

Updates isort from 6.1.0 to 7.0.0

Release notes

Sourced from isort's releases.

7.0.0

Changes

💥 Breaking Changes

🚀 Features

🪲 Fixes

👷 Continuous Integration

📦 Dependencies

Changelog

Sourced from isort's changelog.

Changelog

NOTE: isort follows the semver versioning standard. Find out more about isort's release policy here.

Commits

Updates jupytext from 1.17.3 to 1.18.1

Release notes

Sourced from jupytext's releases.

Version 1.18.1

Fixed

  • Fixed test test_check_source_is_newer_when_using_jupytext_sync to work reliably on systems with low filesystem timestamp resolution (#1460)

Changed

  • We now use pixi to maintain the local Python environments used for developing and testing Jupytext.

Version 1.18.0

Added

  • The documentation has a chapter on the Jupytext Sync extension for VS Code (#1395)
  • We have added a new option --check-source-is-newer to the Jupytext CLI. Use this option if you want to make sure that the file passed as argument to Jupytext is the newest of all paired files, and/or newer than the destination file.
  • We have added a section on Jupyter Collaboration which also provides a very useful autoreload functionality (#406, #1401)
  • Pairing groups allow you to define different pairing configurations for specific subsets of notebooks. The formats configuration option now supports a list of format dictionaries for first-match pairing. Use [[formats]] sections in your TOML configuration to define multiple format specifications, where the first matching format is used. This allows applying different pairing rules to notebooks in different locations, such as generating documentation markdown files only for tutorial notebooks (#1383)
  • We have added more tests to document the complex pairing formats, which also work on Windows (#1028)
  • Pairing into nested folders was fixed on Windows (#1028)
  • Jupytext is now tested with Python 3.14 (#1456)

Fixed

  • The Jupytext CLI now detects if a file it has read or consulted has been modified while it was processing it. That can happen in the context of the Jupytext Sync extension for VS Code (#1411, [vscode-jupytext-sync-#12](caenrigen/vscode-jupytext-sync#12)). When such a synchronous modification is detected, Jupytext now raises an error. Many thanks to Anne Archibald for reporting the issue and preparing an inspiring PR (#1417).
  • We don't import notebook when jupyter_server is available (#1436)
  • Jupytext now supports more characters in the cell metadata keys, to improve compatibility with jupyterlab-slideshow (#1441). Thanks to Nicolas Thierry for this fix.
  • The function find_jupytext_configuration_file now works with relative directories (#1440). This fix was contributed by Thierry Parmentelat.
  • We have fixed a parsing error for R Markdown files (#1429)
  • We have fixed a parsing error when the first cell of the notebook contains a YAML header that is not a dict (#1444)

Changed

Version 1.18.0rc0

Added

  • The documentation has a chapter on the Jupytext Sync extension for VS Code (#1395)
  • We have added a new option --check-source-is-newer to the Jupytext CLI. Use this option if you want to make sure that the file passed as argument to Jupytext is the newest of all paired files, and/or newer than the destination file.
  • We have added a section on Jupyter Collaboration which also provides a very useful autoreload functionality (#406, #1401)
  • Pairing groups allow you to define different pairing configurations for specific subsets of notebooks. The formats configuration option now supports a list of format dictionaries for first-match pairing. Use [[formats]] sections in your TOML configuration to define multiple format specifications, where the first matching format is used. This allows applying different pairing rules to notebooks in different locations, such as generating documentation markdown files only for tutorial notebooks (#1383)
  • We have added more tests do document the complex pairing formats, which also work on Windows (#1028)
  • Pairing into nested folders was fixed on Windows (#1028)
  • Jupytext is now tested with Python 3.14 (#1456)

Fixed

  • The Jupytext CLI now detects if a file it has read or consulted has been modified while it was processing it. That can happen in the context of the Jupytext Sync extension for VS Code (#1411, [vscode-jupytext-sync-#12](caenrigen/vscode-jupytext-sync#12)). When such a synchronous modification is detected, Jupytext now raises an error. Many thanks to Anne Archibald for reporting the issue and preparing an inspiring PR (#1417).
  • We don't import notebook when jupyter_server is available (#1436)
  • Jupytext now support more characters in the cell metadata keys, to improve compatibility with jupyterlab-slideshow (#1441). Thanks to Nicolas Thierry for this fix.
  • The function find_jupytext_configuration_file now works with relative directories (#1440). This fix was contributed by Thierry Parmentelat.
  • We have fixed a parsing error for R Markdown files (#1429)

Changed

Changelog

Sourced from jupytext's changelog.

1.18.1 (2025-10-19)

Fixed

  • Fixed test test_check_source_is_newer_when_using_jupytext_sync to work reliably on systems with low filesystem timestamp resolution (#1460)

Changed

  • We now use pixi to maintain the local Python environments used for developing and testing Jupytext.

1.18.0 (2025-10-18)

Added

  • The documentation has a chapter on the Jupytext Sync extension for VS Code (#1395)
  • We have added a new option --check-source-is-newer to the Jupytext CLI. Use this option if you want to make sure that the file passed as argument to Jupytext is the newest of all paired files, and/or newer than the destination file.
  • We have added a section on Jupyter Collaboration which also provides a very useful autoreload functionality (#406, #1401)
  • Pairing groups allow you to define different pairing configurations for specific subsets of notebooks. The formats configuration option now supports a list of format dictionaries for first-match pairing. Use [[formats]] sections in your TOML configuration to define multiple format specifications, where the first matching format is used. This allows applying different pairing rules to notebooks in different locations, such as generating documentation markdown files only for tutorial notebooks (#1383)
  • We have added more tests to document the complex pairing formats, which also work on Windows (#1028)
  • Pairing into nested folders was fixed on Windows (#1028)
  • Jupytext is now tested with Python 3.14 (#1456)

Fixed

  • The Jupytext CLI now detects if a file it has read or consulted has been modified while it was processing it. That can happen in the context of the Jupytext Sync extension for VS Code (#1411, [vscode-jupytext-sync-#12](caenrigen/vscode-jupytext-sync#12)). When such a synchronous modification is detected, Jupytext now raises an error. Many thanks to Anne Archibald for reporting the issue and preparing an inspiring PR (#1417).
  • We don't import notebook when jupyter_server is available (#1436)
  • Jupytext now supports more characters in the cell metadata keys, to improve compatibility with jupyterlab-slideshow (#1441). Thanks to Nicolas Thierry for this fix.
  • The function find_jupytext_configuration_file now works with relative directories (#1440). This fix was contributed by Thierry Parmentelat.
  • We have fixed a parsing error for R Markdown files (#1429)
  • We have fixed a parsing error when the first cell of the notebook contains a YAML header that is not a dict (#1444)

Changed

Commits
  • 760013e Fix timestamp issue in test_check_source_is_newer_when_using_jupytext_sync (#...
  • 2a9162d Transition to Pixi
  • f412847 Version 1.18.0
  • 860d9c0 Add an example jupyterlab-slideshow notebook
  • b39919e Test Jupytext with Python 3.14 (#1457)
  • 72ed864 Support formats lists for subset-specific notebook pairing (#1453)
  • 0b453a3 Add more tests to demonstrate the pairing, including on Windows
  • f96cfec Revert "Fix Windows path separator issue in paired notebooks (#1454)"
  • 3b47cde Fix Windows path separator issue in paired notebooks (#1454)
  • bc4f23e Fix AttributeError when raw cell contains non-dict YAML content (#1451)
  • Additional commits viewable in compare view

Updates myst-parser from 3.0.1 to 4.0.1

Release notes

Sourced from myst-parser's releases.

v4.0.1

What's Changed

New Contributors

Full Changelog: executablebooks/MyST-Parser@v4.0.0...v4.0.1

v4.0.0

What's Changed

New Contributors

Full Changelog: executablebooks/MyST-Parser@v3.0.1...v4.0.0

Changelog

Sourced from myst-parser's changelog.

4.0.1 - 2025-02-12

🔧 Minor fix for Sphinx 8.2 compatibility (in gh-pr:1013)

4.0.0 - 2024-08-05

This release bumps the supported versions of:

  • Python to 3.10 and greater
  • Sphinx to >=7,<9
  • Docutils to >=0.19,<0.22

Additionally, footnotes are now parsed similar to the corresponding reStructuredText, in that resolution (between definitions and references) and ordering is now deferred to transforms on the doctree (in gh-pr:931).

This allows for the proper interaction with other docutils/sphinx transforms, including those that perform translations, and logging of warnings for duplicate/unreferenced footnote definitions and also for footnote references with no definitions.

See the footnotes guide for more information.

Full Changelog: v3.0.1...v4.0.0

Commits

Most Recent Ignore Conditions Applied to This Pull Request
Dependency Name Ignore Conditions
cloudpathlib [>= 0.20.dev0, < 0.21]

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@dependabot
Bump the python-packages group across 1 directory with 9 updates
02d76dc 
Bumps the python-packages group with 9 updates in the / directory:

| Package | From | To |
| --- | --- | --- |
| [pyarrow](https://github.com/apache/arrow) | `21.0.0` | `22.0.0` |
| [cloudpathlib](https://github.com/drivendataorg/cloudpathlib) | `0.22.0` | `0.23.0` |
| [parsl](https://github.com/Parsl/parsl) | `2025.9.22` | `2025.10.20` |
| [botocore](https://github.com/boto/botocore) | `1.40.45` | `1.40.59` |
| [pillow](https://github.com/python-pillow/Pillow) | `11.3.0` | `12.0.0` |
| [jupyterlab](https://github.com/jupyterlab/jupyterlab) | `4.4.9` | `4.4.10` |
| [isort](https://github.com/PyCQA/isort) | `6.1.0` | `7.0.0` |
| [jupytext](https://github.com/mwouts/jupytext) | `1.17.3` | `1.18.1` |
| [myst-parser](https://github.com/executablebooks/MyST-Parser) | `3.0.1` | `4.0.1` |



Updates `pyarrow` from 21.0.0 to 22.0.0
- [Release notes](https://github.com/apache/arrow/releases)
- [Commits](apache/arrow@apache-arrow-21.0.0...apache-arrow-22.0.0)

Updates `cloudpathlib` from 0.22.0 to 0.23.0
- [Release notes](https://github.com/drivendataorg/cloudpathlib/releases)
- [Changelog](https://github.com/drivendataorg/cloudpathlib/blob/master/HISTORY.md)
- [Commits](drivendataorg/cloudpathlib@v0.22.0...v0.23.0)

Updates `parsl` from 2025.9.22 to 2025.10.20
- [Commits](Parsl/parsl@2025.09.22...2025.10.20)

Updates `botocore` from 1.40.45 to 1.40.59
- [Commits](boto/botocore@1.40.45...1.40.59)

Updates `pillow` from 11.3.0 to 12.0.0
- [Release notes](https://github.com/python-pillow/Pillow/releases)
- [Changelog](https://github.com/python-pillow/Pillow/blob/main/CHANGES.rst)
- [Commits](python-pillow/Pillow@11.3.0...12.0.0)

Updates `jupyterlab` from 4.4.9 to 4.4.10
- [Release notes](https://github.com/jupyterlab/jupyterlab/releases)
- [Changelog](https://github.com/jupyterlab/jupyterlab/blob/main/RELEASE.md)
- [Commits](https://github.com/jupyterlab/jupyterlab/compare/@jupyterlab/lsp@4.4.9...@jupyterlab/lsp@4.4.10)

Updates `isort` from 6.1.0 to 7.0.0
- [Release notes](https://github.com/PyCQA/isort/releases)
- [Changelog](https://github.com/PyCQA/isort/blob/main/CHANGELOG.md)
- [Commits](https://github.com/PyCQA/isort/commits)

Updates `jupytext` from 1.17.3 to 1.18.1
- [Release notes](https://github.com/mwouts/jupytext/releases)
- [Changelog](https://github.com/mwouts/jupytext/blob/main/CHANGELOG.md)
- [Commits](mwouts/jupytext@v1.17.3...v1.18.1)

Updates `myst-parser` from 3.0.1 to 4.0.1
- [Release notes](https://github.com/executablebooks/MyST-Parser/releases)
- [Changelog](https://github.com/executablebooks/MyST-Parser/blob/master/CHANGELOG.md)
- [Commits](executablebooks/MyST-Parser@v3.0.1...v4.0.1)

---
updated-dependencies:
- dependency-name: pyarrow
  dependency-version: 22.0.0
  dependency-type: direct:production
  update-type: version-update:semver-major
  dependency-group: python-packages
- dependency-name: cloudpathlib
  dependency-version: 0.23.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: python-packages
- dependency-name: parsl
  dependency-version: 2025.10.20
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: python-packages
- dependency-name: botocore
  dependency-version: 1.40.59
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: python-packages
- dependency-name: pillow
  dependency-version: 12.0.0
  dependency-type: direct:development
  update-type: version-update:semver-major
  dependency-group: python-packages
- dependency-name: jupyterlab
  dependency-version: 4.4.10
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: python-packages
- dependency-name: isort
  dependency-version: 7.0.0
  dependency-type: direct:development
  update-type: version-update:semver-major
  dependency-group: python-packages
- dependency-name: jupytext
  dependency-version: 1.18.1
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: python-packages
- dependency-name: myst-parser
  dependency-version: 4.0.1
  dependency-type: direct:development
  update-type: version-update:semver-major
  dependency-group: python-packages
...

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@dependabot dependabot bot added dependencies Pull requests that update a dependency file python Pull requests that update Python code labels Oct 27, 2025
@dependabot dependabot bot requested review from d33bs and gwaybio as code owners October 27, 2025 20:01
@dependabot dependabot bot added dependencies Pull requests that update a dependency file python Pull requests that update Python code labels Oct 27, 2025
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d33bs approved these changes Oct 28, 2025
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@dependabot squash and merge

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@dependabot dependabot bot merged commit d7d455d into main Oct 28, 2025
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