Fix: fix the bug when reuse the numerical_basis class instance

[kirk0830]

N.B.

This PR is just an opening of refactor of old Numerical_Basis class. A framework of xml library will be beneficial for making several classes in ABACUS lighter and clean.

Reminder

• Have you linked an issue with this pull request?
• Have you noticed possible changes of behavior below or in the linked issue?
• Have you explained the changes of codes in core modules of ESolver, HSolver, ElecState, Hamilt, Operator or Psi? (ignore if not applicable)

Linked Issue

Fix #3605

What's changed?

• see issue Bug: present Numerical_Basis memory management is risky #3605

Any changes of core modules? (ignore if not applicable)

• change esolver_ks_pw the numerical atomic orbital generation, the life span of numerical_basis instance.

[dyzheng]

LGTM