Skip to content

[BUG] Cell file read incorrectly for 'qe/cp/traj' format #517

@rashidrafeek

Description

@rashidrafeek

When reading a qe/cp/traj output, the cells read from the [prefix].cel file is read incorrectly. The cells written in the [prefix].cel file produced in a cp.x calculation is transposed as mentioned here. But while reading them they are not transposed by dpdata and thereby a transposed cell instead of the original cell is read by dpdata. I noticed this when I tried to use dpdata to read a trajectory I ran previously and used the to_ase_structure function of LabeledSystem to write it into a different format and visualized it. I think the test file which tests this functionality was not created by a quantum espresso cp.x calculation.

I have modified dpdata locally to fix this and have confirmed that transposing the cell gives the desired result by visualizing. I can submit a pull request fixing this if it is okay.

Metadata

Metadata

Assignees

Labels

bugSomething isn't workingqe

Type

No type

Projects

No projects

Milestone

No milestone

Relationships

None yet

Development

No branches or pull requests

Issue actions