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merge devel into master#363

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amcadmus merged 14 commits intodeepmodeling:masterfrom
amcadmus:master
Oct 3, 2022
Merged

merge devel into master#363
amcadmus merged 14 commits intodeepmodeling:masterfrom
amcadmus:master

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@amcadmus amcadmus commented Oct 3, 2022

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amcadmus and others added 14 commits August 3, 2022 11:20
* add unwarp support for lammps dump

* let user choose to unwrap and add unittest case

* temp to revert format changes

* clean up

* add warning for unwrap

* add UnwrapWarning class
Signed-off-by: kiwi <46419582+wankiwi@users.noreply.github.com>

Signed-off-by: kiwi <46419582+wankiwi@users.noreply.github.com>
…ng#355)

it is the realization for discussion deepmodeling#350.

Signed-off-by: Pan Xiang <panxiang126@gmail.com>
This PR adds the `minimize` method to `System` and also the Minimizer
plugins. Also add two minimizers: ASE and AMBER SQM.
@amcadmus amcadmus requested a review from njzjz October 3, 2022 02:33
@amcadmus amcadmus merged commit 2ac2f48 into deepmodeling:master Oct 3, 2022
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7 participants