Merged
Conversation
Signed-off-by: Jinzhe Zeng <jinzhe.zeng@rutgers.edu>
| 'err msg', err, '\n' | ||
| ) | ||
| # convert the output to deepmd/npy format | ||
| sys = dpdata.LabeledSystem(gaussian_output_name, fmt='gaussian/log') |
There was a problem hiding this comment.
Does dpdata assume nopbc for gaussian/log?
Member
Author
There was a problem hiding this comment.
Yes, and it also assumes nopbc for the input file. However, Gaussian does support the PBC condition. PBC should be implemented in dpdata.
Codecov ReportAttention: Patch coverage is
Additional details and impacted files@@ Coverage Diff @@
## master #100 +/- ##
==========================================
+ Coverage 71.81% 72.05% +0.23%
==========================================
Files 65 66 +1
Lines 2743 2788 +45
==========================================
+ Hits 1970 2009 +39
- Misses 773 779 +6 ☔ View full report in Codecov by Sentry. |
| conf_frame=system, | ||
| inputs=inputs, | ||
| ) | ||
|
|
There was a problem hiding this comment.
assert gaussian_input_name is generated and in the right place?
wanghan-iapcm
approved these changes
Dec 22, 2022
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Fix #99.