snakemake-tutorial

Introduction to snakemake as a workflow management tool.

Steps to run this tutorial on Triton Cluster.

1. Clone the project
2. Load the default environment: module load scicomp-python-env
3. Alternatively, use the environment specified in env.yml with the following steps:
   • module load mamba
   • mamba env create --file env.yml
   • source activate snakemake-tutorial