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dpearton/README.md

Dr David Pearton

Genomics Github Page

Current lab:

Andrea Streit

Centre of Craniofacial and Regenerative Biology

Streit-lab Github

Current projects

Single cell RNA-Seq (scRNA-Seq) analysis of early chick placode formation.

Following on from the work of Dr Alex Thierry and Dr Ailin Buzzi on the early specification of placodal, neural crest and neural precursor cells Neural Plate Border in chick. scRNA-sequencing in chick suggests a probabilistic model for cell fate allocation at the neural plate border Github repo at Alex Thiery's page

Popular repositories Loading

  1. enhancer_annotation_and_motif_analysis enhancer_annotation_and_motif_analysis Public

    Forked from Streit-lab/enhancer_annotation_and_motif_analysis

    Mini nextflow pipeline for filtering enhancers associated to differentially expressed genes, and then screening for motifs of interest

    Groovy

  2. dpearton dpearton Public

    Config files for my GitHub profile.

  3. streitlab-nf-modules streitlab-nf-modules Public

    Forked from Streit-lab/streitlab-nf-modules

    custom nf modules not available in NF core or luslab modules

    Nextflow

  4. MSc_GreenEconomy_BBN MSc_GreenEconomy_BBN Public

    Code and data for the BBNet model for the project "Using Bayesian belief network models to assess potential conservation interventions in the iSimangaliso Wetland Park." submitted to the MSc Green …

    R