chore: Upgrade Python requirements

[edx-requirements-bot]

Python requirements update. Please review the changelogs for the upgraded packages.

Deleted obsolete pull_requests:
#116

[edx-requirements-bot]

List of packages in the PR without any issue.

• babel changes from 2.16.0 to 2.17.0
• beautifulsoup4 changes from 4.12.3 to 4.13.3
• cachetools changes from 5.5.0 to 5.5.2
• filelock changes from 3.16.1 to 3.17.0
• jinja2 changes from 3.1.5 to 3.1.6
• nh3 changes from 0.2.20 to 0.2.21
• pbr changes from 6.1.0 to 6.1.1
• pygments changes from 2.18.0 to 2.19.1
• pyproject-api changes from 1.8.0 to 1.9.0
• pytest changes from 8.3.4 to 8.3.5
• sphinx changes from 8.1.3 to 8.2.3
• sphinx-book-theme changes from 1.1.3 to 1.1.4
• stevedore changes from 5.4.0 to 5.4.1
• tox changes from 4.23.2 to 4.24.2
• virtualenv changes from 20.28.0 to 20.29.3

[edx-requirements-bot]

These Packages need manual review..

• [MAJOR] certifi changes from 2024.12.14 to 2025.1.31
• [DOWNGRADE] pydata-sphinx-theme changes from 0.16.1 to 0.15.4
• [NEW] roman-numerals-py (3.1.0) added to the requirements
• [MAJOR] setuptools changes from 75.6.0 to 76.0.0
• [DOWNGRADE] urllib3 changes from 2.3.0 to 2.2.3