Skip to content

Migrate to datajoint v2, requires MySQL 8.0+ and Python 3.10+ #5

@alexevag

Description

@alexevag

Overview

Migrating ethopy to datajoint v2 (≥2.0.0) requires infrastructure upgrades before it can be completed. See the official migration guide:
https://docs.datajoint.com/how-to/migrate-to-v20/

What needs to happen

  1. Upgrade the database server to MySQL 8.0+
  2. Configure character encoding: utf8mb4 charset with utf8mb4_bin collation
  3. Upgrade Python environment to 3.10+
  4. Merge branch fix/datajoint-v2-compatibility which contains the ethopy-side migration changes and is ready — only blocked by the above

Note on MariaDB

datajoint v2 requires MySQL 8.0+ specifically. MariaDB is not supported, it lacks the EXPRESSION column in information_schema.statistics used by datajoint v2's index introspection.

Metadata

Metadata

Assignees

No one assigned

    Labels

    enhancementNew feature or request

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions