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…for Claude engine Add explicit documentation explaining that --allowed-tools has no enforcement effect in bypassPermissions mode (unrestricted bash), and that the MCP gateway allowed: filter is the sole effective tool boundary in that case. - AGENTS.md: Add Claude Engine Tool Enforcement Security Model section - docs/reference/engines.md: Add Claude Tool Enforcement Security Model section - docs/guides/mcps.md: Add gateway-side enforcement note for MCP tool filtering - Add changeset for documentation update Agent-Logs-Url: https://github.com/github/gh-aw/sessions/17ba2d42-4fed-4f67-91ee-88e9c871e902 Co-authored-by: pelikhan <4175913+pelikhan@users.noreply.github.com>
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Hey One minor note for completeness:
Overall this PR looks well-scoped, clearly described, and ready for maintainer review. 🚀
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Pull request overview
Documents the security boundary for Claude workflows when --permission-mode bypassPermissions is selected, clarifying that --allowed-tools is not enforced in that mode and that gateway-side allowed: filtering remains the effective MCP tool boundary.
Changes:
- Added a “Claude Tool Enforcement Security Model” section to the engines reference, including warnings and a summary table.
- Updated the MCP guide to emphasize gateway-level
allowed:enforcement and cross-reference the engines security model section. - Added contributor-facing guidance in
AGENTS.mdand a patch changeset entry.
Show a summary per file
| File | Description |
|---|---|
| docs/src/content/docs/reference/engines.md | Adds a detailed Claude permission-mode/tool-enforcement explanation, warning callout, and summary table. |
| docs/src/content/docs/guides/mcps.md | Notes gateway-level enforcement for allowed: and adds a Claude-specific IMPORTANT callout with a link to the engines reference. |
| AGENTS.md | Adds contributor guidance on Claude permission modes and which parts of the codebase influence tool boundaries. |
| .changeset/patch-document-bypasspermissions-security-boundary.md | Adds a patch changeset describing the documentation update. |
Copilot's findings
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- Files reviewed: 4/4 changed files
- Comments generated: 6
| **Implication for code changes:** | ||
| - `hasBashWildcardInTools()` in `claude_tools.go` determines which mode is selected — changes here affect the security boundary | ||
| - `computeAllowedClaudeToolsString()` builds the `--allowed-tools` string — only effective in `acceptEdits` mode | ||
| - `convert_gateway_config_claude.sh` preserves the `tools` field from gateway output — this is what enforces restrictions in `bypassPermissions` mode |
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The converter referenced here appears to be outdated/misnamed: the workflow gateway conversion for Claude is implemented in actions/setup/js/convert_gateway_config_claude.cjs (and invoked by actions/setup/sh/start_mcp_gateway.sh), not convert_gateway_config_claude.sh. Consider updating this bullet to point at the .cjs converter (or explicitly mention both, if both are still supported), so contributors look at the code path that actually runs in CI.
| - `convert_gateway_config_claude.sh` preserves the `tools` field from gateway output — this is what enforces restrictions in `bypassPermissions` mode | |
| - `actions/setup/js/convert_gateway_config_claude.cjs` (invoked by `actions/setup/sh/start_mcp_gateway.sh`) preserves the `tools` field from gateway output — this is what enforces restrictions in `bypassPermissions` mode |
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| 1. **`acceptEdits` (default)** — Claude Code honors `--allowed-tools` as the effective tool boundary. Workflow `tools:` and `mcp-servers: allowed:` restrictions are enforced client-side. | ||
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| 2. **`bypassPermissions`** — Claude Code silently ignores `--allowed-tools`. Every tool exposed by the MCP gateway is reachable regardless of the workflow's declared tool configuration. This mode is only used when the workflow grants unrestricted bash access (e.g., `bash: "*"`, `bash: [":*"]`, or `bash: null`). |
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This list of unrestricted bash examples should include bash: true (documented elsewhere as equivalent to allowing all bash commands). As written, it suggests bash: true would not trigger bypassPermissions, which conflicts with the documented bash formats and the runtime behavior described in hasBashWildcardInTools.
| 2. **`bypassPermissions`** — Claude Code silently ignores `--allowed-tools`. Every tool exposed by the MCP gateway is reachable regardless of the workflow's declared tool configuration. This mode is only used when the workflow grants unrestricted bash access (e.g., `bash: "*"`, `bash: [":*"]`, or `bash: null`). | |
| 2. **`bypassPermissions`** — Claude Code silently ignores `--allowed-tools`. Every tool exposed by the MCP gateway is reachable regardless of the workflow's declared tool configuration. This mode is only used when the workflow grants unrestricted bash access (e.g., `bash: true`, `bash: "*"`, `bash: [":*"]`, or `bash: null`). |
| When the workflow grants unrestricted bash access — `bash: "*"`, `bash: [":*"]`, or `bash: null` — gh-aw switches to `--permission-mode bypassPermissions`. **In this mode, Claude Code silently ignores `--allowed-tools`.** Every tool exposed by the MCP gateway is reachable regardless of the workflow's declared tool configuration. | ||
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| > [!WARNING] | ||
| > Do not rely on `tools:` or `mcp-servers: allowed:` for security guarantees when unrestricted bash is granted. In `bypassPermissions` mode, the agent can already run arbitrary shell commands, so `--allowed-tools` provides no meaningful additional boundary. |
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The WARNING contradicts the rest of this new section: it says not to rely on mcp-servers: allowed: for security guarantees, but the following “Gateway-side enforcement” subsection states that the gateway allowed: filter is the sole effective tool boundary in bypassPermissions mode. Suggest rewriting the warning to specifically warn against relying on Claude-side tools:/--allowed-tools enforcement when unrestricted bash is granted, while clarifying that gateway allowed: remains the enforced boundary for MCP tools.
| > Do not rely on `tools:` or `mcp-servers: allowed:` for security guarantees when unrestricted bash is granted. In `bypassPermissions` mode, the agent can already run arbitrary shell commands, so `--allowed-tools` provides no meaningful additional boundary. | |
| > Do not rely on Claude-side `tools:` / `--allowed-tools` enforcement for security guarantees when unrestricted bash is granted. In `bypassPermissions` mode, the agent can already run arbitrary shell commands, so the Claude CLI allowlist provides no meaningful additional boundary. However, `mcp-servers: allowed:` remains enforced by the MCP gateway for MCP tools and is still the effective boundary there. |
| ### `bypassPermissions` mode (unrestricted bash) | ||
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| When the workflow grants unrestricted bash access — `bash: "*"`, `bash: [":*"]`, or `bash: null` — gh-aw switches to `--permission-mode bypassPermissions`. **In this mode, Claude Code silently ignores `--allowed-tools`.** Every tool exposed by the MCP gateway is reachable regardless of the workflow's declared tool configuration. | ||
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This list of “unrestricted bash” configurations is incomplete relative to the documented bash: formats elsewhere in the docs (e.g., bash: true is described as equivalent to ['*'] in docs/src/content/docs/reference/tools.md and frontmatter-full.md). Since bash: true also grants unrestricted bash, it should be included here (and in the summary table) as another case that triggers bypassPermissions.
| The `allowed:` filter is enforced at the **MCP gateway level** — the gateway only exposes the listed tools to the agent. This enforcement applies regardless of which AI engine or permission mode is in use. | ||
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| > [!IMPORTANT] | ||
| > For Claude workflows that grant unrestricted bash access (`bash: "*"` or `bash: [":*"]`), Claude runs in `bypassPermissions` mode and its `--allowed-tools` flag is silently ignored. In that case, the `allowed:` gateway filter is the **sole effective tool boundary**. Always specify `allowed:` on each `mcp-servers:` entry when tool restrictions matter. See [Claude Tool Enforcement Security Model](/gh-aw/reference/engines/#claude-tool-enforcement-security-model) for details. |
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This IMPORTANT callout enumerates unrestricted bash as only bash: "*" or bash: [":*"], but the docs also describe bash: true (and bash: null) as “allow all commands”. To avoid misleading workflow authors, please expand this list to include the other equivalent unrestricted forms (at least bash: true and bash: null), matching the engines reference section.
| > For Claude workflows that grant unrestricted bash access (`bash: "*"` or `bash: [":*"]`), Claude runs in `bypassPermissions` mode and its `--allowed-tools` flag is silently ignored. In that case, the `allowed:` gateway filter is the **sole effective tool boundary**. Always specify `allowed:` on each `mcp-servers:` entry when tool restrictions matter. See [Claude Tool Enforcement Security Model](/gh-aw/reference/engines/#claude-tool-enforcement-security-model) for details. | |
| > For Claude workflows that grant unrestricted bash access (`bash: "*"` or `bash: [":*"]`, as well as equivalent allow-all forms like `bash: true` and `bash: null`), Claude runs in `bypassPermissions` mode and its `--allowed-tools` flag is silently ignored. In that case, the `allowed:` gateway filter is the **sole effective tool boundary**. Always specify `allowed:` on each `mcp-servers:` entry when tool restrictions matter. See [Claude Tool Enforcement Security Model](/gh-aw/reference/engines/#claude-tool-enforcement-security-model) for details. |
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| **Two permission modes are used at runtime:** | ||
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| 1. **`acceptEdits` (default)** — Claude Code honors `--allowed-tools` as the effective tool boundary. Workflow `tools:` and `mcp-servers: allowed:` restrictions are enforced client-side. |
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In acceptEdits mode, --allowed-tools is enforced client-side by Claude, but mcp-servers: allowed: is enforced gateway-side (server-side), not client-side. The current wording implies both tools: and mcp-servers: allowed: are client-side restrictions, which is inaccurate and could confuse contributors making security-sensitive changes.
| 1. **`acceptEdits` (default)** — Claude Code honors `--allowed-tools` as the effective tool boundary. Workflow `tools:` and `mcp-servers: allowed:` restrictions are enforced client-side. | |
| 1. **`acceptEdits` (default)** — Claude Code honors `--allowed-tools` as the effective client-side tool boundary. Workflow `tools:` restrictions are reflected in that `--allowed-tools` setting, while `mcp-servers: allowed:` restrictions are enforced gateway-side by the MCP server configuration. |
Add acceptEdits and bypassPermissions mode terms introduced in docs: document Claude bypassPermissions/--allowed-tools security boundary (#28174). Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Claude Code silently ignores
--allowed-toolswhen running in--permission-mode bypassPermissions(triggered by unrestricted bash:bash: "*",bash: [":*"], orbash: null). The MCP gateway'sallowed:filter is the sole effective tool boundary in that mode — but this was undocumented, leaving workflow authors with a false sense of security from their tool allowlists.Changes
AGENTS.md— New "Claude Engine Tool Enforcement Security Model" section for contributors: explains theacceptEdits/bypassPermissionsmode split, which functions control the selection (hasBashWildcardInTools,computeAllowedClaudeToolsString,convert_gateway_config_claude.sh), and why neither enforcement layer should be weakened.docs/reference/engines.md— New "Claude Tool Enforcement Security Model" section documenting both permission modes, a[!WARNING]callout against relying on tool allowlists when unrestricted bash is granted, gateway-side enforcement as the sole boundary inbypassPermissionsmode, and a summary table:--allowed-toolsenforced?allowed:enforced?acceptEditsbash: "*"/bash: [":*"]/bash: nullbypassPermissionsdocs/guides/mcps.md— Added gateway-level enforcement note to "MCP Tool Filtering" with an[!IMPORTANT]callout for Claude workflows using unrestricted bash and a cross-reference to the new security model section.Warning
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x_amd64/vet env -json GO111MODULE x_amd64/vet GOINSECURE GOMOD GOMODCACHE x_amd64/vet(http block)/usr/bin/gh gh run list --json databaseId,number,url,status,conclusion,workflowName,createdAt,startedAt,updatedAt,event,headBranch,headSha,displayTitle --workflow nonexistent-workflow-12345 --limit 6 GOMOD GOMODCACHE 64/pkg/tool/linux_amd64/vet env b/workflows .cfg 64/pkg/tool/linux_amd64/link GOINSECURE GOMOD GOMODCACHE 64/pkg/tool/linux_amd64/link(http block)https://api.github.com/repos/github/gh-aw/contents/.github/workflows/shared/reporting.md/tmp/go-build2499296529/b404/cli.test /tmp/go-build2499296529/b404/cli.test -test.testlogfile=/tmp/go-build2499296529/b404/testlog.txt -test.paniconexit0 -test.v=true -test.parallel=4 -test.timeout=10m0s -test.run=^Test -test.short=true GOINSECURE GOMOD GOMODCACHE x_amd64/compile env -json GO111MODULE x_amd64/compile GOINSECURE GOMOD GOMODCACHE x_amd64/compile(http block)https://api.github.com/repos/github/gh-aw/git/ref/tags/v0.47.4/usr/bin/gh gh api /repos/github/gh-aw/git/ref/tags/v0.47.4 --jq [.object.sha, .object.type] | @tsv --show-toplevel ache/go/1.25.8/x64/pkg/tool/linuTest User /usr/bin/git 0410-35045/test-git 9296529/b204/vetrev-parse ache/go/1.25.8/x--show-toplevel git rev-�� --show-toplevel ache/go/1.25.8/x64/pkg/tool/linux_amd64/vet /usr/bin/git /tmp/go-build307ls -trimpath(http block)https://api.github.com/repos/github/gh-aw/git/ref/tags/v1.0.0/usr/bin/gh gh api /repos/github/gh-aw/git/ref/tags/v1.0.0 --jq [.object.sha, .object.type] | @tsv se 9296529/b007/vet.cfg ache/go/1.25.8/x64/pkg/tool/linux_amd64/vet GOINSECURE GOMOD GOMODCACHE ache/go/1.25.8/x64/pkg/tool/linu-test.v=true(http block)https://api.github.com/repos/github/gh-aw/git/ref/tags/v1.2.3/usr/bin/gh gh api /repos/github/gh-aw/git/ref/tags/v1.2.3 --jq [.object.sha, .object.type] | @tsv adata/main.go GO111MODULE x_amd64/compile GOINSECURE GOMOD GOMODCACHE x_amd64/compile env -json GO111MODULE x_amd64/vet GOINSECURE GOMOD GOMODCACHE 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