Skip to content

Conversation

@niekdejonge
Copy link
Collaborator

@niekdejonge niekdejonge commented Aug 6, 2024

Updates necessary to make matchm 0.27.0 compatible. This removed add_losses. Spec2vec does not directly use this (except for in tutorials). However, the loss_mz_from and loss_mz_to settings could not be set anymore. This PR fixes that.

In addition:

  • Sets version of python to 3.9 (since requirement of matchms)
  • Sets version of matchms to 0.27.0, since compute losses was not available before.

I think this makes everything compatible with the newest version of matchms again.
Still some tests failing, but I think it has nothing to do with the changes here, did you fix something similar for MS2Deepscore before @florian-huber?

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

3 participants