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Pull requests: khanlab/zarrnii

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Pull requests list

Refactor to_imaris() to use intermediate Zarr strategy
#175 opened Dec 16, 2025 by Copilot AI • Draft
6 tasks done
@akhanf
2
Refactor to_imaris() for memory-safe chunked processing
#170 opened Dec 15, 2025 by Copilot AI • Draft
@akhanf
Add weights parameter to density_from_points()
#167 opened Nov 30, 2025 by Copilot AI • Draft
@akhanf
Add logging infrastructure with debug output for scaled processing plugins
#153 opened Nov 25, 2025 by Copilot AI • Draft
@akhanf
Add atlas region visualization method to ZarrNii for QC reporting
#144 opened Nov 22, 2025 by Copilot AI • Draft
@akhanf
2
Replace black, isort, and flake8 with ruff
#113 opened Oct 31, 2025 by Copilot AI • Draft
@akhanf
Implement StarDist deep learning segmentation plugin with optional dependencies
#66 opened Sep 23, 2025 by Copilot AI • Draft
1
@akhanf
Add visualization module with vizarr and VolumeViewer integration
#53 opened Sep 19, 2025 by Copilot AI Loading…
4 tasks done
@akhanf
6
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