MAINT: Ensure limited set of tests are skipped #13053
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drammock
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Jan 9, 2025
Co-authored-by: Daniel McCloy <dan@mccloy.info>
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Jan 20, 2025
Co-authored-by: Daniel McCloy <dan@mccloy.info>
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* upstream/main: (57 commits) Allow lasso selection sensors in a plot_evoked_topo (mne-tools#12071) MAINT: Fix doc build (mne-tools#13076) BUG: Improve sklearn compliance (mne-tools#13065) [pre-commit.ci] pre-commit autoupdate (mne-tools#13073) MAINT: Add Numba to 3.13 test (mne-tools#13075) Bump autofix-ci/action from ff86a557419858bb967097bfc916833f5647fa8c to 551dded8c6cc8a1054039c8bc0b8b48c51dfc6ef in the actions group (mne-tools#13071) [BUG] Correct annotation onset for exportation to EDF and EEGLAB (mne-tools#12656) New feature for removing heart artifacts from EEG or ESG data using a Principal Component Analysis - Optimal Basis Sets (PCA-OBS) algorithm (mne-tools#13037) [BUG] Fix taper weighting in computation of TFR multitaper power (mne-tools#13067) [FIX] Reading an EDF with preload=False and mixed frequency (mne-tools#13069) Fix evoked topomap colorbars, closes mne-tools#13050 (mne-tools#13063) [pre-commit.ci] pre-commit autoupdate (mne-tools#13060) BUG: Fix bug with interval calculation (mne-tools#13062) [DOC] extend documentation for add_channels (mne-tools#13051) Add `combine_tfr` to API (mne-tools#13054) Add `combine_spectrum()` function and allow `grand_average()` to support `Spectrum` data (mne-tools#13058) BUG: Fix bug with helium anon (mne-tools#13056) [ENH] Add option to store and return TFR taper weights (mne-tools#12910) BUG: viz plot window's 'title' argument showed no effect. (mne-tools#12828) MAINT: Ensure limited set of tests are skipped (mne-tools#13053) ...
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Looking at our logs recently I was unhappy that some tests were skipped that I thought should be run on the given CI. So:
MNE_TEST_ALLOW_SKIP(which defaults to not treating any skips as errors)MNE_TEST_ALLOW_SKIPto reasonable values for a few CIs (Windows pip-pre, Ubuntu pip-pre, and Ubuntu conda)>> $GITHUB_ENVinto| tee -a $GITHUB_ENVso that what we're storing gets printed (nicer CI debugging)junit_familywhich is unneeded now that it's the defaultI expect this to fail due to some deps being missing, so I'll need to add one or two more or expand the
ALLOW_SKIPregex to allow them (depending on which makes more sense). Ready for review/mark-for-merge-when-green in the meantime, though (knowing I'll make that change).