Feat pyproj crs#1737

Merged

christianlangevin merged 28 commits into

modflowpy:developfrom

aleaf:feat_pyproj_crs

Apr 26, 2023

Commits on Apr 12, 2023

feat(discretization.Grid): move coordinate reference system handling to a pyproj.CRS instance attached to the grid classes as a .crs attribute
aleaf
committed
feat(discretization.Grid): move coordinate reference system handling to a pyproj.CRS instance attached to the grid classes as a .crs attribute
aleaf
committed
refactor(export): replace epsg and proj4 input arguments with general crs argument and prjfile argument
aleaf
committed
refactor(utils/mfreadnam.py): write crs 'srs' attribute string to namefile header under 'crs' key; read 'proj4' key as crs input
aleaf
committed
refactor(mt3d/mt.py; seawat/swt.py): pass modelgrid.crs attribute to self._modelgrid.set_coord_info() instead of epsg or proj4
aleaf
committed
refactor(discretization/grid.py): write crs to Grid.__repr__ instead of proj4 (needed for a792e7377b8c); fix(Grid.read_usgs_model_reference_file): to handle quoting in usgs.model.reference
aleaf
committed
test(test_modflow.py): refactor to use crs attribute and to use valid coordinate references
aleaf
committed
fix(export/shapefile_utils.py): write well-known text as utf-8 to avoid issues with encoding the degree symbol to ascii; fix the same issue in test_grid.py. Also replace epsg code 4326 in example n…
aleaf
committed
fix(discretization/grid.py): crs wasn't getting set properly
aleaf
committed
refactor(export/netcdf.py):
aleaf
committed
refactor(export/shapefile_utils.py): remove CRS and EpsgReference classes; superceded by pyproj.CRS
aleaf
committed
test:
aleaf
committed
fix(export/shapefile_utils.py): use relpath_safe for printing written filepaths
aleaf
committed
fix(discretization/grid.py): assign epsg and proj4 to crs attribute when reading usgs.model.reference
aleaf
committed
refactor(export): replace epsg and proj4 input arguments with general crs argument and prjfile argument
aleaf
committed
fix(discretization/grid.py): pass crs to write_shapefile()
aleaf
committed
test: add autotest/test_shapefile_utils.py
aleaf
committed
docs(conf.py): add intersphinx_mapping
aleaf
committed
docs(examples/Notebooks): refactor notebooks to use crs argument for coordinate reference input
aleaf
committed
refactor(export/netcdf.py):
aleaf
committed
test(test_export.py::test_export_output): name output file based on test case to hopefully avoid file conflicts with parallel test runs
aleaf
committed
feat(export): support pathlike export file paths
aleaf
committed
docs: updated flopy3_shapefile_export and flopy3_shapefile_features to use crs arg and to reflect deprecation of EpsgReference class
aleaf
committed
fix(flopy/export/utils.py): add line continuations; missing verbose arg
aleaf
committed
docs(discretization): replace ndarray(int/float) with 'int/float or ndarray' (similar to Scipy)
aleaf
committed

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Feat pyproj crs#1737

Feat pyproj crs#1737
christianlangevin merged 28 commits into
modflowpy:developfrom
aleaf:feat_pyproj_crs

Commits on Apr 12, 2023

feat(discretization.Grid): move coordinate reference system handling to a pyproj.CRS instance attached to the grid classes as a .crs attribute

feat(discretization.Grid): move coordinate reference system handling to a pyproj.CRS instance attached to the grid classes as a .crs attribute

refactor(export): replace epsg and proj4 input arguments with general crs argument and prjfile argument

refactor(utils/mfreadnam.py): write crs 'srs' attribute string to namefile header under 'crs' key; read 'proj4' key as crs input

refactor(mt3d/mt.py; seawat/swt.py): pass modelgrid.crs attribute to self._modelgrid.set_coord_info() instead of epsg or proj4

refactor(discretization/grid.py): write crs to Grid.repr instead of proj4 (needed for a792e7377b8c); fix(Grid.read_usgs_model_reference_file): to handle quoting in usgs.model.reference

test(test_modflow.py): refactor to use crs attribute and to use valid coordinate references

fix(export/shapefile_utils.py): write well-known text as utf-8 to avoid issues with encoding the degree symbol to ascii; fix the same issue in test_grid.py. Also replace epsg code 4326 in example n…

fix(discretization/grid.py): crs wasn't getting set properly

refactor(export/netcdf.py):

refactor(export/shapefile_utils.py): remove CRS and EpsgReference classes; superceded by pyproj.CRS

test:

fix(export/shapefile_utils.py): use relpath_safe for printing written filepaths

fix(discretization/grid.py): assign epsg and proj4 to crs attribute when reading usgs.model.reference

refactor(export): replace epsg and proj4 input arguments with general crs argument and prjfile argument

fix(discretization/grid.py): pass crs to write_shapefile()

test: add autotest/test_shapefile_utils.py

docs(conf.py): add intersphinx_mapping

docs(examples/Notebooks): refactor notebooks to use crs argument for coordinate reference input

refactor(export/netcdf.py):

test(test_export.py::test_export_output): name output file based on test case to hopefully avoid file conflicts with parallel test runs

feat(export): support pathlike export file paths

docs: updated flopy3_shapefile_export and flopy3_shapefile_features to use crs arg and to reflect deprecation of EpsgReference class

fix(flopy/export/utils.py): add line continuations; missing verbose arg

docs(discretization): replace ndarray(int/float) with 'int/float or ndarray' (similar to Scipy)

Commits on Apr 19, 2023

test(test_export): change invalid 4111 epsg code to 4431

docs: reference prjfile arg instead of prj

refactor(flopy/utils/crs.py): move deprecated args to get_crs() to **kwargs, and add deprecated directives