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* Created RMD check full for our R package. * Create test-coverage.yml * Create lintr.yml * explain reference semantics sooner to introduce copy_object * run site through github actions * add in website formatting * see if quarto dependency fixes pkgdown namespace error * add quarto depends to website only * removing quarto from suggets cuases error in assigning vignetter builder * Update pkgdown.yaml add quarto to actions * add lines to solve endline error * Update DESCRIPTION * Update pkgdown.yaml, removed white spaces * load library, not load_all * Update _pkgdown.yml * article packages to website needs * Update pkgdown.yaml * dont use vignette builder - render as html * Create pkgdown_quarto.yml * run with default build_site * Update pkgdown_quarto.yml * Update pkgdown_quarto.yml * Update pkgdown_quarto.yml * Update pkgdown_quarto.yml * Update pkgdown_quarto.yml * go back to quarto vignette --------- Co-authored-by: Allison R Mason <31289802+amason30@users.noreply.github.com> Co-authored-by: amason30 <masonar@umich.edu>
* Created RMD check full for our R package. * Create test-coverage.yml * Create lintr.yml * explain reference semantics sooner to introduce copy_object * run site through github actions * add in website formatting * see if quarto dependency fixes pkgdown namespace error * add quarto depends to website only * removing quarto from suggets cuases error in assigning vignetter builder * Update pkgdown.yaml add quarto to actions * add lines to solve endline error * Update DESCRIPTION * Update pkgdown.yaml, removed white spaces * load library, not load_all * Update _pkgdown.yml * article packages to website needs * Update pkgdown.yaml * dont use vignette builder - render as html * Create pkgdown_quarto.yml * run with default build_site * Update pkgdown_quarto.yml * Update pkgdown_quarto.yml * Update pkgdown_quarto.yml * Update pkgdown_quarto.yml * Update pkgdown_quarto.yml * go back to quarto vignette * update todo * start formatter functions for mpactr class construction - tests pass, need to add to the import and constructor functions and test * Allow users to submit feature tables exported from different tools - need to fix global bindings warning for formatter script Co-authored-by: GregJohnson <YoungKrug@users.noreply.github.com> * update TODO * Fix for formatter issues! * Alpha numeric fix * add checks for expected meta_data columns Co-authored-by: GregJohnson <YoungKrug@users.noreply.github.com> * reorganize article to explain the example function sooner * remove notes * test coverage is 100 % for all main scripts * reduce size of example metabpscape df - no more CMD note * fix order of articles on website --------- Co-authored-by: Allison R Mason <31289802+amason30@users.noreply.github.com> Co-authored-by: amason30 <masonar@umich.edu> Co-authored-by: GregJohnson <YoungKrug@users.noreply.github.com>
most recent example with quarto added
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Need to manually fix lines >= 80 characters. |
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