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joverlee521 merged 1 commit into from
Jul 31, 2023
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README: update vendoring to use git subrepo #10

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9 changes: 5 additions & 4 deletions README.md
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Expand Up @@ -9,19 +9,20 @@ Some tools may only live here temporarily before finding a permanent home in

## Vendoring

Nextstrain maintained pathogen repos will use `git subtree` to vendor ingest scripts.
Nextstrain maintained pathogen repos will use [`git subrepo`](https://github.com/ingydotnet/git-subrepo) to vendor ingest scripts.
(See discussion on this decision in https://github.com/nextstrain/ingest/issues/3)

First add the latest ingest scripts to the pathogen repo by running:
If you don't already have `git subrepo` installed, follow the [git subrepo installation instructions](https://github.com/ingydotnet/git-subrepo#installation).
Then add the latest ingest scripts to the pathogen repo by running:

```
git subtree add --prefix ingest/vendored https://github.com/nextstrain/ingest HEAD --squash
git subrepo clone https://github.com/nextstrain/ingest ingest/vendored
```

Any future updates of ingest scripts can be pulled in with:

```
git subtree pull --prefix ingest/vendored https://github.com/nextstrain/ingest HEAD --squash
git subrepo pull ingest/vendored
```

## History
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