docs: Simplify option with keyword#3657
Open
christopher-hakkaart wants to merge 2 commits intomainfrom
Open
Conversation
✅ Deploy Preview for nf-core-docs ready!
To edit notification comments on pull requests, go to your Netlify project configuration. |
✅ Deploy Preview for nf-core-main-site ready!
To edit notification comments on pull requests, go to your Netlify project configuration. |
Member
mahesh-panchal
left a comment
There was a problem hiding this comment.
To me, the idea should be to preserve the cache of the last run, while cleaning up anything before that.
|
|
||
| ```bash | ||
| nextflow clean -f -before $(nextflow log -q | tail -n 1) | ||
| nextflow clean -n last |
Member
There was a problem hiding this comment.
Suggested change
| nextflow clean -n last | |
| nextflow clean -n -before last |
|
|
||
| ### Selective post-execution cleanup | ||
|
|
||
| Nextflow's built-in `clean` command enables targeted removal of work directories. The following command preserves work directories from the current execution while removing directories from previous executions: |
Member
There was a problem hiding this comment.
Let's keep this version, but combine it with the information about last. We want to keep the cache, while cleaning up previous runs.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
docs: Simplify option with keyword
@netlify /docs/tutorials/storage_utilization/managing_work_directory_growth