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Unignore problematic tests #751

@claymcleod

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@claymcleod

With #748, we made it an error to declare files that don't exist. The tests test_as_pairs.wdl, test_keys.wdl, and test_collect_by_key.wdl all reference files that don't exist. This needs to be remedied and the keys need to be unignored.

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S05-in-progress(State) A task that is in progress.T-tests(Topic) Issues related to the conformance tests.

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