Repositories list

• book

  Public
  Repo for Better Code, Better Science book

  HTML

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  Other

  •1•4•11•0•Updated Feb 24, 2026Feb 24, 2026

• bettercode

  Public
  Python repo for Better Code, Better Science

  Jupyter Notebook

  •

  MIT License

  •0•1•0•1•Updated Feb 16, 2026Feb 16, 2026

• example-rnaseq

  Public
  Single-cell RNA-seq analysis example

  Jupyter Notebook

  •0•1•0•0•Updated Jan 20, 2026Jan 20, 2026

• example-simpleworkflow

  Public
  Simple workflow example using Make and snakemake

  Python

  •0•1•0•0•Updated Dec 31, 2025Dec 31, 2025

• example-databases

  Public
  Worked example using several types of databases

  Jupyter Notebook

  •0•0•0•0•Updated Dec 29, 2025Dec 29, 2025

• example-fastlabel

  Public
  Example of AI-assisted coding workflow

  Python

  •0•0•0•0•Updated Dec 29, 2025Dec 29, 2025

• example-accelperm

  Public
  Example of failed AI-assisted coding workflow

  Makefile

  •

  MIT License

  •0•0•0•0•Updated Dec 29, 2025Dec 29, 2025

• example-parcelextract

  Public
  Example of AI-assisted coding workflow

  Python

  •

  MIT License

  •0•0•0•0•Updated Dec 29, 2025Dec 29, 2025

• example-einsumcorr

  Public
  Example of AI-assisted coding workflow

  HTML

  •

  MIT License

  •0•0•0•0•Updated Dec 29, 2025Dec 29, 2025