chore(deps): update dependency snakemake to v9.11.6 #6217

renovate · 2025-09-24T01:22:28Z

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This PR contains the following updates:

Package	Change	Age	Confidence
snakemake	`9.11.4` -> `9.11.6`

Warning

Some dependencies could not be looked up. Check the Dependency Dashboard for more information.

Release Notes

snakemake/snakemake (snakemake)

`v9.11.6`

Compare Source

Bug Fixes

select specific rule from module will raise "rule not defined" that cause #3751 failed (#3753) (d6fa3ca)

`v9.11.5`

Compare Source

Bug Fixes

fail if single-file report is generated with output directories marked for inclusion (#3748) (e2ca738)

Configuration

📅 Schedule: Branch creation - At any time (no schedule defined), Automerge - At any time (no schedule defined).

🚦 Automerge: Enabled.

♻ Rebasing: Whenever PR is behind base branch, or you tick the rebase/retry checkbox.

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github-actions · 2025-09-24T01:32:20Z

✅⚠️MegaLinter analysis: Success with warnings

⚠️ PYTHON / bandit - 68 errors

Run started:2025-09-26 20:15:48.260423

Test results:
>> Issue: [B404:blacklist] Consider possible security implications associated with the subprocess module.
   Severity: Low   Confidence: High
   CWE: CWE-78 (https://cwe.mitre.org/data/definitions/78.html)
   More Info: https://bandit.readthedocs.io/en/1.8.6/blacklists/blacklist_imports.html#b404-import-subprocess
   Location: ./.automation/build.py:11:0
10	import shutil
11	import subprocess
12	import sys

--------------------------------------------------
>> Issue: [B105:hardcoded_password_string] Possible hardcoded password: ''
   Severity: Low   Confidence: Medium
   CWE: CWE-259 (https://cwe.mitre.org/data/definitions/259.html)
   More Info: https://bandit.readthedocs.io/en/1.8.6/plugins/b105_hardcoded_password_string.html
   Location: ./.automation/build.py:3064:35
3063	                api_github_headers = {"content-type": "application/json"}
3064	                use_github_token = ""
3065	                if "GITHUB_TOKEN" in os.environ:

--------------------------------------------------
>> Issue: [B105:hardcoded_password_string] Possible hardcoded password: ' (with GITHUB_TOKEN)'
   Severity: Low   Confidence: Medium
   CWE: CWE-259 (https://cwe.mitre.org/data/definitions/259.html)
   More Info: https://bandit.readthedocs.io/en/1.8.6/plugins/b105_hardcoded_password_string.html
   Location: ./.automation/build.py:3068:39
3067	                    api_github_headers["authorization"] = f"Bearer {github_token}"
3068	                    use_github_token = " (with GITHUB_TOKEN)"
3069	                logging.info(

--------------------------------------------------
>> Issue: [B602:subprocess_popen_with_shell_equals_true] subprocess call with shell=True identified, security issue.
   Severity: High   Confidence: High
   CWE: CWE-78 (https://cwe.mitre.org/data/definitions/78.html)
   More Info: https://bandit.readthedocs.io/en/1.8.6/plugins/b602_subprocess_popen_with_shell_equals_true.html
   Location: ./.automation/build.py:3445:14
3444	        cwd=cwd,
3445	        shell=True,
3446	        executable=None if sys.platform == "win32" else which("bash"),
3447	    )
3448	    stdout = utils.clean_string(process.stdout)
3449	    logging.info(f"Format table results: ({process.returncode})\n" + stdout)
3450	
3451	
3452	def generate_version():
3453	    # npm version
3454	    logging.info("Updating npm package version…")

--------------------------------------------------
>> Issue: [B607:start_process_with_partial_path] Starting a process with a partial executable path
   Severity: Low   Confidence: High
   CWE: CWE-78 (https://cwe.mitre.org/data/definitions/78.html)
   More Info: https://bandit.readthedocs.io/en/1.8.6/plugins/b607_start_process_with_partial_path.html
   Location: ./.automation/build.py:3456:14
3455	    cwd_to_use = os.getcwd() + "/mega-linter-runner"
3456	    process = subprocess.run(
3457	        [
3458	            "npm",
3459	            "version",
3460	            "--newversion",
3461	            RELEASE_TAG,
3462	            "-no-git-tag-version",
3463	            "--no-commit-hooks",
3464	        ],
3465	        stdout=subprocess.PIPE,
3466	        universal_newlines=True,
3467	        cwd=cwd_to_use,
3468	        shell=True,
3469	    )
3470	    print(process.stdout)

--------------------------------------------------
>> Issue: [B602:subprocess_popen_with_shell_equals_true] subprocess call with shell=True identified, security issue.
   Severity: High   Confidence: High
   CWE: CWE-78 (https://cwe.mitre.org/data/definitions/78.html)
   More Info: https://bandit.readthedocs.io/en/1.8.6/plugins/b602_subprocess_popen_with_shell_equals_true.html
   Location: ./.automation/build.py:3468:14
3467	        cwd=cwd_to_use,
3468	        shell=True,
3469	    )
3470	    print(process.stdout)
3471	    print(process.stderr)
3472	    # Update python project version:
3473	    process = subprocess.run(
3474	        ["hatch", "version", RELEASE_TAG],
3475	        stdout=subprocess.PIPE,
3476	        text=True,
3477	        shell=True,
3478	        check=True,
3479	    )
3480	    # Update changelog
3481	    if UPDATE_CHANGELOG is True:
3482	        changelog_file = f"{REPO_HOME}/CHANGELOG.md"

--------------------------------------------------
>> Issue: [B607:start_process_with_partial_path] Starting a process with a partial executable path
   Severity: Low   Confidence: High
   CWE: CWE-78 (https://cwe.mitre.org/data/definitions/78.html)
   More Info: https://bandit.readthedocs.io/en/1.8.6/plugins/b607_start_process_with_partial_path.html
   Location: ./.automation/build.py:3473:14
3472	    # Update python project version:
3473	    process = subprocess.run(
3474	        ["hatch", "version", RELEASE_TAG],
3475	        stdout=subprocess.PIPE,
3476	        text=True,
3477	        shell=True,
3478	        check=True,
3479	    )
3480	    # Update changelog

--------------------------------------------------
>> Issue: [B602:subprocess_popen_with_shell_equals_true] subprocess call with shell=True identified, security issue.
   Severity: High   Confidence: High
   CWE: CWE-78 (https://cwe.mitre.org/data/definitions/78.html)
   More Info: https://bandit.readthedocs.io/en/1.8.6/plugins/b602_subprocess_popen_with_shell_equals_true.html
   Location: ./.automation/build.py:3477:14
3476	        text=True,
3477	        shell=True,
3478	        check=True,
3479	    )
3480	    # Update changelog
3481	    if UPDATE_CHANGELOG is True:
3482	        changelog_file = f"{REPO_HOME}/CHANGELOG.md"
3483	        with open(changelog_file, "r", encoding="utf-8") as md_file:
3484	            changelog_content = md_file.read()

--------------------------------------------------
>> Issue: [B60

(Truncated to 5714 characters out of 43076)

⚠️ BASH / bash-exec - 1 error

Results of bash-exec linter (version 5.2.37)
See documentation on https://megalinter.io/beta/descriptors/bash_bash_exec/
-----------------------------------------------

✅ [SUCCESS] .automation/build_schemas_doc.sh
✅ [SUCCESS] .automation/format-tables.sh
✅ [SUCCESS] .vscode/testlinter.sh
✅ [SUCCESS] build.sh
✅ [SUCCESS] entrypoint.sh
❌ [ERROR] sh/megalinter_exec
    Error: File:[sh/megalinter_exec] is not executable

⚠️ REPOSITORY / grype - 31 errors

[0000]  WARN no explicit name and version provided for directory source, deriving artifact ID from the given path (which is not ideal)
NAME                           INSTALLED  FIXED IN  TYPE    VULNERABILITY        SEVERITY  EPSS           RISK   
ejs                            3.1.6      3.1.7     npm     GHSA-phwq-j96m-2c2q  Critical  93.5% (99th)   87.9   
tar                            6.0.1      6.1.1     npm     GHSA-3jfq-g458-7qm9  High      85.5% (99th)   67.1   
requests                       2.24.0     2.31.0    python  GHSA-j8r2-6x86-q33q  Medium    6.1% (90th)    3.4    
ip                             1.1.5                npm     GHSA-2p57-rm9w-gvfp  High      2.9% (85th)    2.3    
minimist                       1.2.5      1.2.6     npm     GHSA-xvch-5gv4-984h  Critical  1.2% (78th)    1.1    
ejs                            3.1.6      3.1.10    npm     GHSA-ghr5-ch3p-vcr6  Medium    1.3% (79th)    0.6    
tar                            6.0.1      6.1.9     npm     GHSA-5955-9wpr-37jh  High      0.6% (68th)    0.5    
node-fetch                     2.6.6      2.6.7     npm     GHSA-r683-j2x4-v87g  High      0.5% (65th)    0.4    
minimatch                      3.0.4      3.0.5     npm     GHSA-f8q6-p94x-37v3  High      0.5% (63rd)    0.3    
semver                         7.3.5      7.5.2     npm     GHSA-c2qf-rxjj-qqgw  High      0.3% (54th)    0.2    
braces                         3.0.2      3.0.3     npm     GHSA-grv7-fg5c-xmjg  High      0.2% (45th)    0.2    
ansi-regex                     3.0.0      3.0.1     npm     GHSA-93q8-gq69-wqmw  High      0.2% (44th)    0.2    
tar                            6.0.1      6.1.2     npm     GHSA-r628-mhmh-qjhw  High      0.2% (42nd)    0.2    
@octokit/request-error         2.1.0      5.1.1     npm     GHSA-xx4v-prfh-6cgc  Medium    0.3% (53rd)    0.2    
@octokit/request               5.6.2      8.4.1     npm     GHSA-rmvr-2pp2-xj38  Medium    0.3% (50th)    0.1    
http-cache-semantics           4.1.0      4.1.1     npm     GHSA-rc47-6667-2j5j  High      0.2% (37th)    0.1    
ip                             1.1.5      1.1.9     npm     GHSA-78xj-cgh5-2h22  Low       0.4% (59th)    0.1    
tar                            6.0.1      6.2.1     npm     GHSA-f5x3-32g6-xq36  Medium    0.2% (42nd)    0.1    
tar                            6.1.11     6.2.1     npm     GHSA-f5x3-32g6-xq36  Medium    0.2% (42nd)    0.1    
cross-spawn                    7.0.3      7.0.5     npm     GHSA-3xgq-45jj-v275  High      0.1% (33rd)    < 0.1  
@octokit/plugin-paginate-rest  2.17.0     9.2.2     npm     GHSA-h5c3-5r3r-rr8q  Medium    0.1% (33rd)    < 0.1  
micromatch                     4.0.4      4.0.8     npm     GHSA-952p-6rrq-rcjv  Medium    0.1% (32nd)    < 0.1  
requests                       2.24.0     2.32.4    python  GHSA-9hjg-9r4m-mvj7  Medium    < 0.1% (24th)  < 0.1  
debug                          4.2.0      4.3.1     npm     GHSA-gxpj-cx7g-858c  Low       < 0.1% (27th)  < 0.1  
tar                            6.0.1      6.1.7     npm     GHSA-9r2w-394v-53qc  High      < 0.1% (6th)   < 0.1  
word-wrap                      1.2.3      1.2.4     npm     GHSA-j8xg-fqg3-53r7  Medium    < 0.1% (12th)  < 0.1  
tar                            6.0.1      6.1.9     npm     GHSA-qq89-hq3f-393p  High      < 0.1% (4th)   < 0.1  
requests                       2.24.0     2.32.0    python  GHSA-9wx4-h78v-vm56  Medium    < 0.1% (8th)   < 0.1  
tmp                            0.0.33     0.2.4     npm     GHSA-52f5-9888-hmc6  Low       < 0.1% (9th)   < 0.1  
brace-expansion                1.1.11     1.1.12    npm     GHSA-v6h2-p8h4-qcjw  Low       < 0.1% (4th)   < 0.1  
brace-expansion                2.0.1      2.0.2     npm     GHSA-v6h2-p8h4-qcjw  Low       < 0.1% (4th)   < 0.1
[0031] ERROR discovered vulnerabilities at or above the severity threshold

⚠️ SPELL / lychee - 12 errors

[WARN ] WARNING: `--exclude-mail` is deprecated and will soon be removed; E-Mail is no longer checked by default. Use `--include-mail` to enable E-Mail checking.
[403] https://npmjs.org/package/mega-linter-runner | Network error: Forbidden
[403] https://npmjs.org/package/mega-linter-runner | Error (cached)
[403] https://htmlhint.com/integrations/task-runner/ | Network error: Forbidden
[403] https://htmlhint.com/integrations/task-runner/ | Error (cached)
[403] https://htmlhint.com/configuration/ | Network error: Forbidden
[403] https://htmlhint.com/ | Network error: Forbidden
[403] https://htmlhint.com/docs/user-guide/list-rules | Network error: Forbidden
[403] https://www.npmjs.com/package/markdown-table-formatter | Network error: Forbidden
[404] https://plugins.jetbrains.com/plugin/11563-flake8-support | Network error: Not Found
[404] https://marketplace.visualstudio.com/items?itemName=ForceConfigControl.lightningflowscanner | Network error: Not Found
[404] https://raw.githubusercontent.com/Lightning-Flow-Scanner/.github/main/docs/images/bannerslim.png | Network error: Not Found
[404] https://raku.org/camelia-logo.png | Network error: Not Found
[TIMEOUT] https://www.gnu.org/software/bash/manual/bash.html | Timeout
[TIMEOUT] https://www.gnu.org/software/bash/ | Timeout
[TIMEOUT] https://www.nongnu.org/chktex | Timeout
[TIMEOUT] https://www.nongnu.org/chktex/ | Timeout
[TIMEOUT] https://plugins.netbeans.apache.org/catalogue/?id=36 | Timeout
📝 Summary
---------------------
🔍 Total.........2357
✅ Successful....1880
⏳ Timeouts.........5
🔀 Redirected.......0
👻 Excluded.......460
❓ Unknown..........0
🚫 Errors..........12

Errors in README.md
[403] https://htmlhint.com/integrations/task-runner/ | Network error: Forbidden
[403] https://npmjs.org/package/mega-linter-runner | Network error: Forbidden

Errors in megalinter/descriptors/latex.megalinter-descriptor.yml
[TIMEOUT] https://www.nongnu.org/chktex/ | Timeout
[TIMEOUT] https://www.nongnu.org/chktex | Timeout

Errors in megalinter/descriptors/salesforce.megalinter-descriptor.yml
[404] https://raw.githubusercontent.com/Lightning-Flow-Scanner/.github/main/docs/images/bannerslim.png | Network error: Not Found
[404] https://marketplace.visualstudio.com/items?itemName=ForceConfigControl.lightningflowscanner | Network error: Not Found

Errors in megalinter/descriptors/html.megalinter-descriptor.yml
[403] https://htmlhint.com/configuration/ | Network error: Forbidden
[403] https://htmlhint.com/ | Network error: Forbidden
[403] https://htmlhint.com/docs/user-guide/list-rules | Network error: Forbidden
[403] https://htmlhint.com/integrations/task-runner/ | Error (cached)

Errors in megalinter/descriptors/php.megalinter-descriptor.yml
[TIMEOUT] https://plugins.netbeans.apache.org/catalogue/?id=36 | Timeout

Errors in mega-linter-runner/README.md
[403] https://npmjs.org/package/mega-linter-runner | Error (cached)

Errors in megalinter/descriptors/markdown.megalinter-descriptor.yml
[403] https://www.npmjs.com/package/markdown-table-formatter | Network error: Forbidden

Errors in megalinter/descriptors/bash.megalinter-descriptor.yml
[TIMEOUT] https://www.gnu.org/software/bash/manual/bash.html | Timeout
[TIMEOUT] https://www.gnu.org/software/bash/ | Timeout

Errors in megalinter/descriptors/python.megalinter-descriptor.yml
[404] https://plugins.jetbrains.com/plugin/11563-flake8-support | Network error: Not Found

Errors in megalinter/descriptors/raku.megalinter-descriptor.yml
[404] https://raku.org/camelia-logo.png | Network error: Not Found

⚠️ MARKDOWN / markdownlint - 308 errors

.github/copilot-instructions.md:9 MD040/fenced-code-language Fenced code blocks should have a language specified [Context: "```"]
.github/copilot-instructions.md:156 MD040/fenced-code-language Fenced code blocks should have a language specified [Context: "```"]
.github/linters/valestyles/proselint/README.md:12:601 MD013/line-length Line length [Expected: 600; Actual: 755]
CHANGELOG.md:22:90 MD059/descriptive-link-text Link text should be descriptive [Context: "[here]"]
CHANGELOG.md:2032:87 MD059/descriptive-link-text Link text should be descriptive [Context: "[here]"]
docs/articles.md:8 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "They talk about MegaLinter"]
docs/badge.md:9 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "Badge"]
docs/config-activation.md:9 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "Activation and deactivation"]
docs/config-apply-fixes.md:9 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "Apply fixes"]
docs/config-cli-lint-mode.md:9 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "CLI lint mode"]
docs/config-file.md:9 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: ".mega-linter.yml file"]
docs/config-filtering.md:9 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "Filter linted files"]
docs/config-linters.md:9 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "Linter specific variables"]
docs/config-postcommands.md:9 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "Post-commands"]
docs/config-precommands.md:9 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "Pre-commands"]
docs/config-variables-security.md:9 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "Environment variables security"]
docs/config-variables.md:9 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "Common variables"]
docs/configuration.md:9 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "Configuration"]
docs/descriptors/action_actionlint.md:7 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "actionlint"]
docs/descriptors/action.md:8 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "ACTION"]
docs/descriptors/ansible_ansible_lint.md:7 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "ansible-lint"]
docs/descriptors/ansible_ansible_lint.md:8:601 MD013/line-length Line length [Expected: 600; Actual: 795]
docs/descriptors/ansible.md:8 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "ANSIBLE"]
docs/descriptors/api_spectral.md:14:601 MD013/line-length Line length [Expected: 600; Actual: 746]
docs/descriptors/api.md:8 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "API"]
docs/descriptors/arm_arm_ttk.md:7 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "arm-ttk"]
docs/descriptors/arm.md:8 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "ARM"]
docs/descriptors/bash_bash_exec.md:7 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "bash-exec"]
docs/descriptors/bash_shellcheck.md:7 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "shellcheck"]
docs/descriptors/bash_shellcheck.md:8:601 MD013/line-length Line length [Expected: 600; Actual: 785]
docs/descriptors/bash_shfmt.md:7 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "shfmt"]
docs/descriptors/bash.md:8 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "BASH"]
docs/descriptors/bicep_bicep_linter.md:7 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "bicep_linter"]
docs/descriptors/bicep.md:8 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "BICEP"]
docs/descriptors/c_clang_format.md:7 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "clang-format"]
docs/descriptors/c_clang_format.md:8:601 MD013/line-length Line length [Expected: 600; Actual: 768]
docs/descriptors/c_cppcheck.md:7 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "cppcheck"]
docs/descriptors/c_cpplint.md:7 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "cpplint"]
docs/descriptors/c.md:8 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "C"]
docs/descriptors/clojure_cljstyle.md:7 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "cljstyle"]
docs/descriptors/clojure_cljstyle.md:8:601 MD013/line-length Line length [Expected: 600; Actual: 768]
docs/descriptors/clojure.md:8 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "CLOJURE"]
docs/descriptors/cloudformation_cfn_lint.md:14:601 MD013/line-length Line length [Expected: 600; Actual: 865]
docs/descriptors/cloudformation.md:8 MD025/single-title/single-h1 Multiple top-level headings in the same document [Context: "CLOUDFORMATION"]
docs/descriptors/coffee_coffeelint.md:7 MD025/single-title/single-h1 Multiple top-level headings 

(Truncated to 5714 characters out of 38238)

⚠️ YAML / prettier - 6 errors

.automation/plugins.yml 117ms (unchanged)
.github/FUNDING.yml 6ms (unchanged)
.github/dependabot.yml 41ms (unchanged)
.github/linters/.cfnlintrc.yml 5ms (unchanged)
.github/linters/.checkov.yml 3ms (unchanged)
.github/linters/.golangci.yml 5ms (unchanged)
.github/linters/.hadolint.yml 2ms (unchanged)
.github/linters/.openapirc.yml 2ms (unchanged)
.github/linters/.protolintrc.yml 9ms (unchanged)
.github/linters/.ruby-lint.yml 2ms (unchanged)
.github/linters/.yamllint.yml 14ms (unchanged)
.github/linters/analysis_options.yml 12ms (unchanged)
.github/linters/valestyles/Microsoft/AMPM.yml 3ms (unchanged)
.github/linters/valestyles/Microsoft/Accessibility.yml 7ms (unchanged)
.github/linters/valestyles/Microsoft/Acronyms.yml 13ms (unchanged)
.github/linters/valestyles/Microsoft/Adverbs.yml 53ms (unchanged)
.github/linters/valestyles/Microsoft/Auto.yml 7ms (unchanged)
.github/linters/valestyles/Microsoft/Avoid.yml 2ms (unchanged)
.github/linters/valestyles/Microsoft/ComplexWords.yml 43ms (unchanged)
.github/linters/valestyles/Microsoft/Contractions.yml 4ms (unchanged)
.github/linters/valestyles/Microsoft/Dashes.yml 9ms (unchanged)
.github/linters/valestyles/Microsoft/DateFormat.yml 2ms (unchanged)
.github/linters/valestyles/Microsoft/DateNumbers.yml 7ms (unchanged)
.github/linters/valestyles/Microsoft/DateOrder.yml 2ms (unchanged)
.github/linters/valestyles/Microsoft/Ellipses.yml 4ms (unchanged)
.github/linters/valestyles/Microsoft/FirstPerson.yml 3ms (unchanged)
.github/linters/valestyles/Microsoft/Foreign.yml 2ms (unchanged)
.github/linters/valestyles/Microsoft/Gender.yml 2ms (unchanged)
.github/linters/valestyles/Microsoft/GenderBias.yml 6ms (unchanged)
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cursor · 2025-09-26T20:13:19Z

megalinter/descriptors/snakemake.megalinter-descriptor.yml

        - |-
          # renovate: datasource=pypi depName=snakemake
-          ARG PIP_SNAKEMAKE_VERSION=9.11.4
+          ARG PIP_SNAKEMAKE_VERSION=9.11.6


Bug: Version Mismatch in PR and Dockerfile

The PR title and description indicate updating snakemake to v9.11.5, but the code updates PIP_SNAKEMAKE_VERSION to v9.11.6. This inconsistency across all relevant Dockerfile changes might cause confusion or lead to deploying an unexpected version.

Additional Locations (3)

flavors/python/Dockerfile#L182-L183

flavors/salesforce/Dockerfile#L164-L165

flavors/rust/Dockerfile#L152-L153

renovate bot requested review from echoix and nvuillam as code owners September 24, 2025 01:22

renovate bot added the dependencies Pull requests that update a dependency file label Sep 24, 2025

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renovate bot added the dependencies Pull requests that update a dependency file label Sep 24, 2025

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chore(deps): update dependency snakemake to v9.11.6

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renovate bot changed the title ~~chore(deps): update dependency snakemake to v9.11.5~~ chore(deps): update dependency snakemake to v9.11.6 Sep 26, 2025

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chore(deps): update dependency snakemake to v9.11.6 #6217

chore(deps): update dependency snakemake to v9.11.6 #6217

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chore(deps): update dependency snakemake to v9.11.6 #6217

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v9.11.6

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renovate bot commented Sep 24, 2025 •

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`v9.11.6`

`v9.11.5`

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