Add python-3.12.10-scientific-slim runenv variant

.changeset/scientific-slim-variant.md

@@ -0,0 +1,6 @@
+---
+'@platforma-open/milaboratories.runenv-python-3.12.10-scientific-slim': patch
+'@platforma-open/milaboratories.runenv-python-3': minor
+---
+
+Add `python-3.12.10-scientific-slim` runenv variant bundling only `polars-lts-cpu`, `numpy`, `scipy`, and `pyarrow`. Intended for blocks with tabular/scientific Python stacks that do not need the full ML toolchain (TensorFlow, torch, transformers, etc.) shipped by the base `3.12.10` runenv. Bundled size is ~100 MB vs. the base runenv's ~2.5 GB.

catalogue/package.json

@@ -29,6 +29,9 @@
       },
       "3.12.10-parapred": {
         "reference": "@platforma-open/milaboratories.runenv-python-3.12.10-parapred/dist/tengo/software/main.sw.json"
+      },
+      "3.12.10-scientific-slim": {
+        "reference": "@platforma-open/milaboratories.runenv-python-3.12.10-scientific-slim/dist/tengo/software/main.sw.json"
       }
     }
   },
@@ -42,7 +45,8 @@
     "@platforma-open/milaboratories.runenv-python-3.12.10-sccoda": "workspace:*",
     "@platforma-open/milaboratories.runenv-python-3.12.10-rapids": "workspace:*",
     "@platforma-open/milaboratories.runenv-python-3.12.10-h5ad": "workspace:*",
-    "@platforma-open/milaboratories.runenv-python-3.12.10-parapred": "workspace:*"
+    "@platforma-open/milaboratories.runenv-python-3.12.10-parapred": "workspace:*",
+    "@platforma-open/milaboratories.runenv-python-3.12.10-scientific-slim": "workspace:*"
   },
   "devDependencies": {
     "@platforma-sdk/package-builder": "catalog:"

pnpm-workspace.yaml

@@ -7,6 +7,7 @@ packages:
   - python-3.12.10-rapids
   - python-3.12.10-h5ad
   - python-3.12.10-parapred
+  - python-3.12.10-scientific-slim
   - catalogue
 
 catalog:

python-3.12.10-scientific-slim/config.json

@@ -0,0 +1,12 @@
+{
+  "packages": {
+    "dependencies": [
+      "polars-lts-cpu==1.33.1",
+      "numpy==2.2.6",
+      "scipy==1.15.3",
+      "pyarrow==21.0.0"
+    ],
+    "skip": {},
+    "platformSpecific": {}
+  }
+}

python-3.12.10-scientific-slim/package.json

@@ -0,0 +1,43 @@
+{
+  "name": "@platforma-open/milaboratories.runenv-python-3.12.10-scientific-slim",
+  "version": "1.0.0",
+  "description": "Python 3.12.10 run environment bundling polars-lts-cpu, numpy, scipy, and pyarrow for scientific/tabular workloads",
+  "scripts": {
+    "cleanup": "rm -rf ./pkg-*.tgz ./pydist ./dist/ ./build/",
+    "reset": "pnpm run cleanup && rm -rf ./node_modules ./.turbo",
+    "build": "pl-py-builder",
+    "after-prebuild": "pl-pkg publish packages",
+    "before-publish": "pl-pkg prepublish"
+  },
+  "files": [
+    "dist/"
+  ],
+  "block-software": {
+    "entrypoints": {
+      "main": {
+        "environment": {
+          "artifact": {
+            "type": "environment",
+            "runtime": "python",
+            "registry": "platforma-open",
+            "python-version": "3.12.10",
+            "roots": {
+              "linux-x64": "./pydist/linux-x64",
+              "linux-aarch64": "./pydist/linux-aarch64",
+              "macosx-x64": "./pydist/macosx-x64",
+              "macosx-aarch64": "./pydist/macosx-aarch64",
+              "windows-x64": "./pydist/windows-x64"
+            },
+            "binDir": "bin"
+          }
+        }
+      }
+    }
+  },
+  "license": "UNLICENSED",
+  "devDependencies": {
+    "@platforma-sdk/package-builder": "catalog:",
+    "runenv-python-builder": "workspace:*",
+    "tsx": "catalog:"
+  }
+}