Compbio Final Project

• Please see final_project.ipynb to learn about our methods and final project
• create_database.ipynb provides code to create a database connecting mp3 pathology and genbank information
• analyze_database.ipynb provides code to load such a database. It also shows some example queries. Finally, it provides some tools to analyze the database.
• salmonella_database_truncated.pkl is an example database using some of the class data