Initialize

.github/workflows/test.yml

@@ -0,0 +1,42 @@
+name: Test CompRiskReg with R
+on:
+  push:
+    branches:
+      - main
+  pull_request:
+    branches:
+      - main
+
+jobs:
+  test-python-only:
+    runs-on: ubuntu-latest
+    strategy:
+      fail-fast: false
+      matrix:
+        python-version: ["3.9", "3.10", "3.11", "3.12", "3.13", "3.14"]
+    steps:
+      - uses: actions/checkout@v4
+      - uses: actions/setup-python@v5
+        with:
+          python-version: ${{ matrix.python-version }}
+      - run: pip install -e ".[test]"
+      - run: pytest -m "not requires_r"
+
+  test-with-r:
+    runs-on: ubuntu-latest
+    strategy:
+      fail-fast: false
+      matrix:
+        python-version: ["3.9", "3.10", "3.11", "3.12", "3.13", "3.14"]
+    steps:
+      - uses: actions/checkout@v4
+      - uses: actions/setup-python@v5
+        with:
+          python-version: ${{ matrix.python-version }}
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          r-version: "release"
+      - name: Install R cmprsk
+        run: Rscript -e "install.packages('cmprsk', repos='https://cloud.r-project.org')"
+      - run: pip install -e ".[test]"
+      - run: pytest -m "requires_r"

.gitignore

@@ -205,3 +205,5 @@ cython_debug/
 marimo/_static/
 marimo/_lsp/
 __marimo__/
+uv.lock
+.DS_store

CompRiskReg/__init__.py

@@ -0,0 +1,5 @@
+from .crr import crr
+from .cuminc import cuminc, timepoints
+
+__all__ = ["crr", "timepoints", "cuminc"]
+__version__ = "1.0.0"