tests | only check final thermal conductivity

.github/workflows/ci_simple_compilation_and_test.yml

@@ -21,7 +21,6 @@ jobs:
         uses: actions/checkout@v4
         with:
           repository: tdep-developers/tdep
-          ref: fk_github_ci
       - run: echo "💡 The ${{ github.repository }} repository has been cloned to the runner."
       - run: echo "🔎 The name of your branch is ${{ github.ref }} and your repository is ${{ github.repository }}."
       - name: Install packages required for building TDEP

tests/thermal_conductivity/test_thermal_conductivity.py

@@ -1,17 +1,15 @@
 import numpy as np
 import xarray as xr
 from pathlib import Path
-import pytest
 
 parent = Path(__file__).parent
 folder = parent / "reference"
 
-files_hdf5 = [
-    "outfile.thermal_conductivity_grid.hdf5",
-]
+file = "outfile.thermal_conductivity"
+file_hdf5 = "outfile.thermal_conductivity_grid.hdf5"
 
 
-def test_thermal_conductivity(file="outfile.thermal_conductivity", atol=20, rtol=5):
+def test_thermal_conductivity(file=file, atol=1, rtol=0.1):
     file_ref = folder / file
     file_new = parent / file
 
@@ -23,39 +21,9 @@ def test_thermal_conductivity(file="outfile.thermal_conductivity", atol=20, rtol
     )
 
 
-def get_variables(file):
-    """Helper function to get variables from a dataset"""
-    return list(xr.load_dataset(folder / file).data_vars)
-
-
-def generate_test_cases(files=files_hdf5):
-    """Generate test cases combining files and their variables"""
-    test_cases = []
-    for file in files:
-        vars = get_variables(file)
-        for var in vars:
-            test_cases.append((file, var))
-    return test_cases
-
-
-@pytest.mark.parametrize("file,var", generate_test_cases())
-def test_hdf5(file, var, atol=1, rtol=0.01):
-    """Test HDF5 files by comparing variables between reference and new datasets"""
-    file_ref = folder / file
-    file_new = parent / file
-
-    ds_ref = xr.load_dataset(file_ref)
-    ds_new = xr.load_dataset(file_new)
-
-    x = ds_ref[var]
-    y = ds_new[var]
-
-    np.testing.assert_allclose(x, y, atol=atol, rtol=rtol, err_msg=var)
-
-
 def test_conductivity_comparison(
-    file="outfile.thermal_conductivity",
-    file_grid="outfile.thermal_conductivity_grid.hdf5",
+    file=parent / file,
+    file_grid=parent / file_hdf5,
 ):
     """Check if the thermal conducivities conincide"""
     data1 = np.loadtxt(file)
@@ -72,5 +40,4 @@ def test_conductivity_comparison(
 
 if __name__ == "__main__":
     test_thermal_conductivity()
-    test_hdf5()
     test_conductivity_comparison()