Add NPT Nose-Hoover Triclinic integrator#2
Open
thomasloux wants to merge 1 commit intomainfrom
Open
Conversation
Implements the Martyna-Tobias-Klein (MTK) equations of motion for fully
flexible cell NPT dynamics with Nose-Hoover chain thermostats. Supports
both lower-triangular ("tri", 6 DOF) and unconstrained ("full", 9 DOF)
cell coupling modes.
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Summary
"tri", 6 DOF) and unconstrained ("full", 9 DOF) cell coupling modesNPTNoseHooverTriclinicState,npt_nose_hoover_triclinic_init,npt_nose_hoover_triclinic_step, andnpt_nose_hoover_triclinic_invariantTest plan
test_npt_nose_hoover_triclinic_step_accepts_float_inputs— float args acceptedtest_npt_nose_hoover_triclinic_invariant_conservation— conserved quantity stable over 200 stepstest_npt_nose_hoover_triclinic_tri_coupling— cell momentum stays lower-triangulartest_integrators.pysuite passes (25/25)🤖 Generated with Claude Code