Make Java errors "requested alignment is not a power of 2"

[Callroy]

Hello
I'm attempting to test the serial connection between my Iris mote and PC, when i used "Java TestSerial" I got the error

cal@cal-VirtualBox:~/tinyos-main/apps/TestSerial$ java TestSerial
Exception in thread "main" java.lang.NoClassDefFoundError: TestSerial
Caused by: java.lang.ClassNotFoundException: TestSerial
at java.net.URLClassLoader$1.run(URLClassLoader.java:202)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:190)
at java.lang.ClassLoader.loadClass(ClassLoader.java:306)
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
at java.lang.ClassLoader.loadClass(ClassLoader.java:247)
Could not find the main class: TestSerial. Program will exit.

To see if my java was set up correct I used "make" in "tinyos/support/sdk/java" and i get the below output where the errors are "Requested Alignment is not a power of 2"

cal@cal-VirtualBox:~/tinyos-main/support/sdk/java$ make
... /home/cal/tinyos-main/support/sdk/java
make[1]: Entering directory '/home/cal/tinyos-main/support/sdk/java/net'
... /home/cal/tinyos-main/support/sdk/java/net
make[2]: Entering directory '/home/cal/tinyos-main/support/sdk/java/net/tinyos'
... /home/cal/tinyos-main/support/sdk/java/net/tinyos
make[3]: Entering directory '/home/cal/tinyos-main/support/sdk/java/net/tinyos/packet'
... /home/cal/tinyos-main/support/sdk/java/net/tinyos/packet
ncg -o Serial.java -java-classname=net.tinyos.packet.Serial java /home/cal/tinyos-main/tos/lib/serial/Serial.h Serial.h
In file included from /usr/lib/i386-linux-gnu/ncc/deputy_nodeputy.h:4:
/usr/lib/gcc/i686-linux-gnu/5/include/stddef.h:429: requested alignment is not a power of 2
failed to parse nesC file /home/cal/tinyos-main/tos/lib/serial/Serial.h
Makefile:12: recipe for target 'Serial.java' failed
make[3]: *** [Serial.java] Error 1
make[3]: Leaving directory '/home/cal/tinyos-main/support/sdk/java/net/tinyos/packet'
make[3]: Entering directory '/home/cal/tinyos-main/support/sdk/java/net/tinyos/message'
... /home/cal/tinyos-main/support/sdk/java/net/tinyos/message
mig -o SerialPacket.java -java-classname=net.tinyos.message.SerialPacket java /home/cal/tinyos-main/tos/lib/serial/Serial.h serial_packet -I/home/cal/tinyos-main/tos/types
In file included from /usr/lib/i386-linux-gnu/ncc/deputy_nodeputy.h:4:
/usr/lib/gcc/i686-linux-gnu/5/include/stddef.h:429: requested alignment is not a power of 2
failed to parse message file /home/cal/tinyos-main/tos/lib/serial/Serial.h
Makefile:12: recipe for target 'SerialPacket.java' failed
make[3]: *** [SerialPacket.java] Error 1
make[3]: Leaving directory '/home/cal/tinyos-main/support/sdk/java/net/tinyos/message'
make[3]: Entering directory '/home/cal/tinyos-main/support/sdk/java/net/tinyos/sf'
... /home/cal/tinyos-main/support/sdk/java/net/tinyos/sf
make[3]: Leaving directory '/home/cal/tinyos-main/support/sdk/java/net/tinyos/sf'
make[3]: Entering directory '/home/cal/tinyos-main/support/sdk/java/net/tinyos/tools'
... /home/cal/tinyos-main/support/sdk/java/net/tinyos/tools
mig java -java-classname=net.tinyos.tools.PrintfMsg /home/cal/tinyos-main/tos/lib/printf/printf.h printf_msg -o PrintfMsg.java
In file included from /usr/lib/i386-linux-gnu/ncc/deputy_nodeputy.h:4:
/usr/lib/gcc/i686-linux-gnu/5/include/stddef.h:429: requested alignment is not a power of 2
/home/cal/tinyos-main/tos/lib/printf/printf.h:44:2: warning: #warning " *************************** PRINTF SEMANTICS HAVE CHANGED! ********************************************* Make sure you now include the following two components in your top level application file: PrintfC and SerialStartC. To supress this warning in the future, #define the variable NEW_PRINTF_SEMANTICS. Take a look at the updated tutorial application under apps/tutorials/printf for an example. ************************************************************************************"
failed to parse message file /home/cal/tinyos-main/tos/lib/printf/printf.h
Makefile:16: recipe for target 'PrintfMsg.java' failed
make[3]: *** [PrintfMsg.java] Error 1
make[3]: Leaving directory '/home/cal/tinyos-main/support/sdk/java/net/tinyos/tools'
make[3]: Entering directory '/home/cal/tinyos-main/support/sdk/java/net/tinyos/sim'
... /home/cal/tinyos-main/support/sdk/java/net/tinyos/sim
make[3]: Leaving directory '/home/cal/tinyos-main/support/sdk/java/net/tinyos/sim'
make[3]: Entering directory '/home/cal/tinyos-main/support/sdk/java/net/tinyos/util'
... /home/cal/tinyos-main/support/sdk/java/net/tinyos/util
make[3]: Leaving directory '/home/cal/tinyos-main/support/sdk/java/net/tinyos/util'
make[3]: Entering directory '/home/cal/tinyos-main/support/sdk/java/net/tinyos/comm'
... /home/cal/tinyos-main/support/sdk/java/net/tinyos/comm
make[3]: Leaving directory '/home/cal/tinyos-main/support/sdk/java/net/tinyos/comm'
make[3]: Entering directory '/home/cal/tinyos-main/support/sdk/java/net/tinyos/mviz'
... /home/cal/tinyos-main/support/sdk/java/net/tinyos/mviz
make[3]: Leaving directory '/home/cal/tinyos-main/support/sdk/java/net/tinyos/mviz'
make[2]: Leaving directory '/home/cal/tinyos-main/support/sdk/java/net/tinyos'
make[1]: Leaving directory '/home/cal/tinyos-main/support/sdk/java/net'

Can anyone offer some guidance on what the issue here is or a potential resolution?

Thank you