MethPhaser: methylation-based haplotype phasing of human genomes
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Mar 5, 2025 - Python
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haplotype-blocks
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LDlink is a suite of web-based applications designed to easily and efficiently interrogate linkage disequilibrium in population groups. Each included application is specialized for querying and displaying unique aspects of linkage disequilibrium.
linkage-disequilibrium population-genetics haplotype-blocks genome-wide-association-studies single-nucleotide-polymorphisms ld-analysis ld-statistics ld-visualization
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Feb 11, 2026 - Python
Polyploid micro-haplotype assembly using Markov chain Monte Carlo simulation.
numpy array haplotypes bayesian-inference dna-sequences genotyping polyploidy haplotype-assembly haplotype-blocks polyploid-genotyping
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Nov 17, 2025 - Python
HaploExplore software repository
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Nov 4, 2025 - Python
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