run: remove deprecated -y|--yes#3737
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❗ I have followed the Contributing to DVC checklist.
📖 If this PR requires documentation updates, I have created a separate PR (or issue, at least) in dvc.org and linked it here. If the CLI API is changed, I have updated tab completion scripts.
treeverse/dvc.org#1229
Thank you for the contribution - we'll try to review it as soon as possible. 🙏