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Level 2 warning instead of kludge/STOP1 for negative ncore #3065

@timothy-nunn

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@timothy-nunn
          I probably need @jonmaddock to comment on this, as he is the one that wrote the kludge. For now, since this is a level 2 error, I will approve it but will make a follow-up issue to check that this fix is ok with the UQ tools (which is why the kludge was added)

Originally posted by @timothy-nunn in #3060 (comment)

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